Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0222 |
Symbol | def |
ID | 4682275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 192643 |
End bp | 193170 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 639852947 |
Product | peptide deformylase |
Protein accession | YP_999910 |
Protein GI | 121612384 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAGAA AAATTATCAC TTATCCTAAT CCTAGACTTT TTTTAAACTC TGAAATTGTA AATAAATTTG ATACAGAACT TCACACCTTG CTTGATGATA TGTATGAAAC TATGATAGCA AGTAATGGAG TAGGTTTAGC GGCTATTCAA GTAGATATTC CTTTGCGTGT TTTACTTGTA AATATTTTTA ATGAAAATGA TGAACAAAAA AAAGAAGATT TGCTAGAGAT TATCAATCCT GAAATTATTC CTTTAGATGA AGAAATGATC ACTTGTACCG AAGGGTGTTT GAGTGTGCCA GATTTTTTTG AAGAAGTGAA ACGCTATAAT CATATCTTGC TTAAATATCA AGATCGCTTT GGAGAATTTA AAGAACTTGA AGCAAAAGGT TTTTTAGCTG TGGCTATTCA ACACGAAAAT GATCATTTGA ATGGACATTT ATTTATAGAA AAAATTTCTT TTGCTAAGCG TCAAAAATTC GATAAAGAAT TTAAGAAAAA GAAGAAAAAT CATAAAAAAG AGAAATGA
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Protein sequence | MVRKIITYPN PRLFLNSEIV NKFDTELHTL LDDMYETMIA SNGVGLAAIQ VDIPLRVLLV NIFNENDEQK KEDLLEIINP EIIPLDEEMI TCTEGCLSVP DFFEEVKRYN HILLKYQDRF GEFKELEAKG FLAVAIQHEN DHLNGHLFIE KISFAKRQKF DKEFKKKKKN HKKEK
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