| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0049 |
|---|
| Symbol | |
|---|
| ID | 4682257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | - |
|---|
| Start bp | 27267 |
|---|
| End bp | 28169 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 639852773 |
|---|
| Product | RNA pseudouridine synthase family protein |
|---|
| Protein accession | YP_999742 |
|---|
| Protein GI | 121613293 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTACA TAAAAATAAA ACTCTCAAAC AATGGAAAAA AGGCGTTTCA AGTCCTTATG
GAAAATTTAA AAATTAGCAT AAATGAAGCA CAAAAACTCA TAGACAAAAA AAGACTTTTT
TGTGATGGAA TTTTAGTAGA AGAAAAGAAT AAAATTTTAA ATGGTTTAGT AGAGCTTATA
GTCTATGAAA ACAATCCCAA AGGAGTAGAA ATTGTCTTTG AAAATGAAGA CTTTGCCATA
CTTGAAAAAG AAAGTGGGAT CTTAAGCCAT CCAAATGGTA GACATTGCAA ATACAGTCTT
AGTGATGAAA TTTGGCATCT TTGGGGAAAA GAAGCTTGCG TAGCACACAG GCTCGATAAA
GAAACGAGCG GACTTATACT TATAGCCAAA AATAAAAAAG CTCAAATTGA TCTTAAAAGC
TTGTTTGAAA AAAAACTAGT TCAAAAAGAA TACCTTGCTC TAGCTCATGG AAAAATAGAA
GAAAATTTTA TAGTTGATAA AGCTATAAAT TTAACTAAAA ACTACGATGA TGTAAAAACA
AGAATGCAAA TTTGCAAAGA AGGAAAACAA GCTATCACTG AATTTGAAAT TTTAGAATAC
TTTCCTAAAA TCAACGCTAC TCTTTTACTT TGTAAACCCT TAACAGGCAG ACAACATCAA
ATAAGAGTGC ATTTACACTA TAAAAATCAT ACCATTTTAG GCGATCCACT TTATGGGCTT
AGCAAACAAC AAATCGAAAG TATTTTAGAT GAAAAATTAA ATCCTAAAGA ACGCTTAAAA
CTTACAGGTG CCTTGCGTTT GTGTTTGCAT TCTTATCGTT TGAAATTTCA ATATAAAAAT
CAAAATTTTG ATATCAACTC AAAAATAAAC ATAAAAGAAA TTTTCAACAA TTCCATAAAA
TAA
|
|---|
| Protein sequence | MAYIKIKLSN NGKKAFQVLM ENLKISINEA QKLIDKKRLF CDGILVEEKN KILNGLVELI
VYENNPKGVE IVFENEDFAI LEKESGILSH PNGRHCKYSL SDEIWHLWGK EACVAHRLDK
ETSGLILIAK NKKAQIDLKS LFEKKLVQKE YLALAHGKIE ENFIVDKAIN LTKNYDDVKT
RMQICKEGKQ AITEFEILEY FPKINATLLL CKPLTGRQHQ IRVHLHYKNH TILGDPLYGL
SKQQIESILD EKLNPKERLK LTGALRLCLH SYRLKFQYKN QNFDINSKIN IKEIFNNSIK
|
|---|
| |