Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0003 |
Symbol | |
ID | 4682146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 1595507 |
End bp | 1596268 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639854433 |
Product | RNA pseudouridine synthase family protein |
Protein accession | YP_001001353 |
Protein GI | 121612851 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000522631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTA ATAAATTTAT ATCCCATAAC ACTCGTTATT CACGCCGTGA AGCTGATGAA CTTATCAAAC AAGGCTTAGT AAAAATAAAC AACAAAATTG CCCTTTTAAG CGATGAAGTT AAATTTGATG ATAAAGTCTT TGTTAAGGGC AAAAGAGTGC AAAAAAGAAC GCAATTTAGC GTGATAATCT ACCATAAACA AAAAGGTGAA ATTGTCAGTA AAAAAGACGA TCGTGGAAGA AAAACTATAT ACGATACCTT GCCAAGACAA TTTAGTACTT GGCTTAGCGT AGGTAGGCTG GATTATGCAA GCGAGGGCTT GCTTTTGCTT ACAGATTCTC CTGTGATTGC TAATGCTTTA ATGCATAGCG ATTTAGAAAG AGAATACTAC CTTAAAGTTA AAGGTACGGT GAGCAAACAA GTCATCGAAG CCATGCAAAA TGGGCTTGAG ATTAAAAATG AAAAAAAAGG CGCACACGCA AAAACCAAAA TCACCTCTAT GAGTTTTGCT CCTTTTATAG ACTTTGAAAT TTTTGGATCA AGTGGAGGTT ATACTAAGCT TAGAGTGGTT ATAAATGAAG GTAAAAATAG AGAGCTTAGA CGCTTTTTTG GACATTTTGA TCTTGAAGTC ATGGATCTTA AGCGTGTTGC TTTTGGGGCT TTAGATCTTG GTATGTTAAA GGCGGGAAAA CATCGCTATT TGGAAAATGG AGAATATGAA AAATTAAGAG ATTTTTTGAA ATTTAATGAA ATAAGATATT GA
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Protein sequence | MRINKFISHN TRYSRREADE LIKQGLVKIN NKIALLSDEV KFDDKVFVKG KRVQKRTQFS VIIYHKQKGE IVSKKDDRGR KTIYDTLPRQ FSTWLSVGRL DYASEGLLLL TDSPVIANAL MHSDLEREYY LKVKGTVSKQ VIEAMQNGLE IKNEKKGAHA KTKITSMSFA PFIDFEIFGS SGGYTKLRVV INEGKNRELR RFFGHFDLEV MDLKRVAFGA LDLGMLKAGK HRYLENGEYE KLRDFLKFNE IRY
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