Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4987 |
Symbol | |
ID | 4694633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 5516765 |
End bp | 5519056 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639852722 |
Product | outer membrane protein |
Protein accession | YP_999691 |
Protein GI | 121611884 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02059] cyanobacterial long protein repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCACA GCATCTACAT GAATGACTCC GCCCTCAAAG CCGGCGAAAC GGCGAGAGTC ACCGTCTTCA TCGACAACAC GTACAACCCG GTATTGCGAT GCACAGGGGT GCACCTTCGG CTCGATGGCC TGGACTTTTC GCAGGCCCCT GGCACGGTGG AATATGTGAC CAGCGCAACG CTCGCCGGGG GTACCAATTA CTACTTCGAC CTCACCCCCA CCCCGAACAC GCAGAACGCC GGCGGCACCA TCCGCATGAG CATTCCCGCC GCAGGTGACC GCCCTGCCAG CAACCTGATC AAGACCTACA CCGCCGACAC ACAGCGGCCC ACTCTCGCCT CCACCTACCG ACTCTCGCCC GACTGCGACT TGAGCGCCGG CGATACAGCC ACCATCACCT TCAGCTTTTC CGAGCCGGTC ACCGGCTTGA TCATCGATGA CCTGACGATA CCGACGGGCA AGGGCACGCT GAGCGACCTG CGCACCACCG ACGGCGGCAC CAATTGGACG ATAGACCTGA GGGCGCCGGC CACCTTGCCG GCCAACACCC CTGAGGATGT CCAGATCACC GTCAACATGG ACGGCATCAC CGATGCTGCG GGCAACGCGG GCACGGGAAG CGCAACCCTT GCCACCTACA GCCTCGGCAA CAAGCCGCCC AGCATCGTCT CTGTGGTCGG CCCCAGCTCC ATCGTCTTGG AGGACACCGA CGTCACCATT ACCTTCACCT TCAGCGAGGC AGTCACCGGC TTCACGTTGG CCAACATCAA TTTGGACAAC TCCAGTGCCT CTCCCTACAT CACCTTCAGC CCGAAAGCGC CGGTCAGCGC AGATGGTGGC CGCACCTGGA CCATCACCTA CCATGCCAGT CCGCATGTCG CGGGTGATTC CACCAACACC GTCAGCATCC GCAACCTCGA TGGCGTGCGT GACCTCGCAG GCAACGCCGC AGTGCCTAAC TCCAGCGCCA GCACCGACAA CTACGAGGTC GACGCCGTGG ATCCCCATCC CACCAGCGCC ACGTTTGACA AAGCGCGCCT CACCGCTGGC GAAACCGCCA CCGTCACCGT CACCTTCAAC GAGAGCGTCA GTGACTTCAC CGAAGCTGCC ATTCAGATCG CCAACGGTTC TGTCAGCGAC CTGACGCCGG TCGCCGGCTC CGACAACCGC ATCTGGACAG CCACCTTCAC CCCCACGGCC GACCTGGCGC GCACCAGCAG CGAGATCAGC ATCGAGCTGG ACGGCCTCAG AGATCGCGCC GGCAACGTCA ACAGTGGTAT CCAGCCGTTC TACGACTCCA CCATCGCCAT CGACACCAAG GTCTTTGCCG TCAACGACGC TACGGTGAAC GGCAGGCAAT TGGTCTTGCG CTACAGCGAT GAAACCGCGC TGGACCCGGA CCAGGCACAT AACGCGCCCA ACGATGCCTT TGTGGTGCTG GTCGATGGTG TGCGCAACGA TGTCGCCGGC GTGGCCGTGG ATGCAGCGGC CAAGACCATC ACGCTGACGC TGGTCAACGC CGTGCGCGGG GGCCAGCGGG TGAGCGTCGC CTACAACGAC CCCAGCACCG GCAACGACCT GCAAGCGGTG CAGGAAGCCG GCACCGGCAC CACCAGCGGC CACGACGCGG CCAGTTTTGC GGCCAGGTCG GTGACCAACC TCAGCCCGGA TAGGATTGAC GACGATACGT CGACGCCGGA CTCCGACCAC GACAGTGTGC CCAACGTCCA GGAGGACCAG GCCCCCGGTC TGCTGCGCCC CGATGGCTCG GCCGGCCCGG ATGGCGACGG CAACGGCGAC GATGTCCAGG ACAGCCAGCA GGCCGCCGTC GCTTCGACCC GCGACCTGAC CCTGGTGGCC GGCAGCCAGG ACGGCAAGCT GATCCCCGAC AGCAACGCGC GCATCAGCGA AATGGCGTTC AACGAACCCC CCGCCAATCA GCCCAAGGGC ATGGAGACGC CGATCGGACT GACGCAATTC AAGGTCGACC TGACCGAAGG TCACAGCACC GAGAGCTTCA GCCTGTACGT AGACCAGGCG CTTGGCGTCA ACGGCTTCTG GGTCAAGGAC AGCGCCGGCA CCTGGGTGAA CCTGGCCAGC GAACCCTACG GCGGCAAGGT GGCCAGCGAA GGCGGGCGCA CGCGGCTGGA CTTTCAGATC GAGGATGGCG GCCAGTACGA TGCCGACGGC CAGGCCGATG GCAACATCAC CGCCCTTGGC GCCGCAGCGA AGATGCCGCT GTCCATCGTC GGGCAGGCGC CCCAGGTCGA GTCGCATGGC TTTTGGTACT GA
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Protein sequence | MAHSIYMNDS ALKAGETARV TVFIDNTYNP VLRCTGVHLR LDGLDFSQAP GTVEYVTSAT LAGGTNYYFD LTPTPNTQNA GGTIRMSIPA AGDRPASNLI KTYTADTQRP TLASTYRLSP DCDLSAGDTA TITFSFSEPV TGLIIDDLTI PTGKGTLSDL RTTDGGTNWT IDLRAPATLP ANTPEDVQIT VNMDGITDAA GNAGTGSATL ATYSLGNKPP SIVSVVGPSS IVLEDTDVTI TFTFSEAVTG FTLANINLDN SSASPYITFS PKAPVSADGG RTWTITYHAS PHVAGDSTNT VSIRNLDGVR DLAGNAAVPN SSASTDNYEV DAVDPHPTSA TFDKARLTAG ETATVTVTFN ESVSDFTEAA IQIANGSVSD LTPVAGSDNR IWTATFTPTA DLARTSSEIS IELDGLRDRA GNVNSGIQPF YDSTIAIDTK VFAVNDATVN GRQLVLRYSD ETALDPDQAH NAPNDAFVVL VDGVRNDVAG VAVDAAAKTI TLTLVNAVRG GQRVSVAYND PSTGNDLQAV QEAGTGTTSG HDAASFAARS VTNLSPDRID DDTSTPDSDH DSVPNVQEDQ APGLLRPDGS AGPDGDGNGD DVQDSQQAAV ASTRDLTLVA GSQDGKLIPD SNARISEMAF NEPPANQPKG METPIGLTQF KVDLTEGHST ESFSLYVDQA LGVNGFWVKD SAGTWVNLAS EPYGGKVASE GGRTRLDFQI EDGGQYDADG QADGNITALG AAAKMPLSIV GQAPQVESHG FWY
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