Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4978 |
Symbol | |
ID | 4690521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 5508110 |
End bp | 5509330 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639852713 |
Product | hypothetical protein |
Protein accession | YP_999682 |
Protein GI | 121611875 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.638405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAA CCGGCAGGCC GGGCATGCGC AAAAACGGGT TCCTGCGCAA CGGCCGATGG GCATGGGCAT GGCTGCTGGC CTGCCTGTGC TCCTGGGCCG CAGCCGCGCC GCCAGTGCGC ATCGCCGTGG TGTCGCTGGC CGACGATCCG CGCTATGACC GCCGGCAGTT GGAAAAACGC TACCCGGGAC ACCCCGAAGG GCGTCCGCTC GATGGCGCCA AGGTCGCCGC CGCCGAATCG CGCTTCGCGC TCGATGCCAT CGGCGTGACA TTGGTGCTGG AGCCGATCGA AGTCCGTGCC GCCGCCGACA TCGCCGCCAC CGTGAGCGAT CTGCTGCGCC AGAACGTGCA GTATTTCGTG CTCGACCTGC CCGCGCCTGC CGTGGTGCAG GCCACCCGGG CCGCTGCGGC GGCGCAGGCG CTGCTGCTCA ACGTCTCTGC CGACGACGAC AGCTTGCGCG GCGCCGACTG CGCGCCCCAT CTGCTGCACA CCCTGCCCAG TCTGCGCATG CGCAGCGACG CGCTGCTGCA ATACCTGGCC GCGCGCAAAT GGCGCAAGGG CCTGCTGTTG CATGGCCCGC TGCCGGCGGA CCGGCAGCAG CAGGCCGCAT TCCTGCAATC GGCCAAACGC TTCGGCGTGG CCTGGTCCGC GCAGCGCCCG TTCAAACTGT CCAACGACCC GCGCGAGCGC GACCTGTCCA ACCTGAACCT GTTGACCACC GGGGTCGACT ACGACGCCAT CGTGGTCGCC GACAGCGCCG GCGAATTTGC CCGCTCGCTG CCCTATGCCA GCGCGTTGCC GCGCCCGGTG GCCGGCGCCA ACGGCCTGAC CGCGCAAGCC TGGCACTGGG CCTGGGAGCG CAACGGCGGG CCGCAACTGA GCCGGCGCTT TGGCAAATCG GCCGGCCGGC CGATGACCAG CTTCGACTGG GCCGCCTGGG CCGCCGTGAA AGCAGTGGTG GCAGCGGTGA CGCTCTGGCC CCAAGCGGGC TTTGCCCGGC AGCGCGAGGC GCTGATCTCC GGCGAAGTGG TGCTCGACGG CTTCAAAGGG CCGCGCCTGA GCTTTCGCCC CTGGGACGGG CAATTGCGCC AGCCGCTGTT TCTGGCCCAC CCCGATGGCG TGATCGCCAC GGCGCCGCTG GAGGGCTTCC TGCATCCGAA AAACGACCTC GACACGCTCG GTGCGGATGC CCCGGAAACA GCGTGCCGCA AAGCCCGTTG A
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Protein sequence | MIETGRPGMR KNGFLRNGRW AWAWLLACLC SWAAAAPPVR IAVVSLADDP RYDRRQLEKR YPGHPEGRPL DGAKVAAAES RFALDAIGVT LVLEPIEVRA AADIAATVSD LLRQNVQYFV LDLPAPAVVQ ATRAAAAAQA LLLNVSADDD SLRGADCAPH LLHTLPSLRM RSDALLQYLA ARKWRKGLLL HGPLPADRQQ QAAFLQSAKR FGVAWSAQRP FKLSNDPRER DLSNLNLLTT GVDYDAIVVA DSAGEFARSL PYASALPRPV AGANGLTAQA WHWAWERNGG PQLSRRFGKS AGRPMTSFDW AAWAAVKAVV AAVTLWPQAG FARQREALIS GEVVLDGFKG PRLSFRPWDG QLRQPLFLAH PDGVIATAPL EGFLHPKNDL DTLGADAPET ACRKAR
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