Gene Veis_4978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4978 
Symbol 
ID4690521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5508110 
End bp5509330 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content70% 
IMG OID639852713 
Producthypothetical protein 
Protein accessionYP_999682 
Protein GI121611875 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.638405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA CCGGCAGGCC GGGCATGCGC AAAAACGGGT TCCTGCGCAA CGGCCGATGG 
GCATGGGCAT GGCTGCTGGC CTGCCTGTGC TCCTGGGCCG CAGCCGCGCC GCCAGTGCGC
ATCGCCGTGG TGTCGCTGGC CGACGATCCG CGCTATGACC GCCGGCAGTT GGAAAAACGC
TACCCGGGAC ACCCCGAAGG GCGTCCGCTC GATGGCGCCA AGGTCGCCGC CGCCGAATCG
CGCTTCGCGC TCGATGCCAT CGGCGTGACA TTGGTGCTGG AGCCGATCGA AGTCCGTGCC
GCCGCCGACA TCGCCGCCAC CGTGAGCGAT CTGCTGCGCC AGAACGTGCA GTATTTCGTG
CTCGACCTGC CCGCGCCTGC CGTGGTGCAG GCCACCCGGG CCGCTGCGGC GGCGCAGGCG
CTGCTGCTCA ACGTCTCTGC CGACGACGAC AGCTTGCGCG GCGCCGACTG CGCGCCCCAT
CTGCTGCACA CCCTGCCCAG TCTGCGCATG CGCAGCGACG CGCTGCTGCA ATACCTGGCC
GCGCGCAAAT GGCGCAAGGG CCTGCTGTTG CATGGCCCGC TGCCGGCGGA CCGGCAGCAG
CAGGCCGCAT TCCTGCAATC GGCCAAACGC TTCGGCGTGG CCTGGTCCGC GCAGCGCCCG
TTCAAACTGT CCAACGACCC GCGCGAGCGC GACCTGTCCA ACCTGAACCT GTTGACCACC
GGGGTCGACT ACGACGCCAT CGTGGTCGCC GACAGCGCCG GCGAATTTGC CCGCTCGCTG
CCCTATGCCA GCGCGTTGCC GCGCCCGGTG GCCGGCGCCA ACGGCCTGAC CGCGCAAGCC
TGGCACTGGG CCTGGGAGCG CAACGGCGGG CCGCAACTGA GCCGGCGCTT TGGCAAATCG
GCCGGCCGGC CGATGACCAG CTTCGACTGG GCCGCCTGGG CCGCCGTGAA AGCAGTGGTG
GCAGCGGTGA CGCTCTGGCC CCAAGCGGGC TTTGCCCGGC AGCGCGAGGC GCTGATCTCC
GGCGAAGTGG TGCTCGACGG CTTCAAAGGG CCGCGCCTGA GCTTTCGCCC CTGGGACGGG
CAATTGCGCC AGCCGCTGTT TCTGGCCCAC CCCGATGGCG TGATCGCCAC GGCGCCGCTG
GAGGGCTTCC TGCATCCGAA AAACGACCTC GACACGCTCG GTGCGGATGC CCCGGAAACA
GCGTGCCGCA AAGCCCGTTG A
 
Protein sequence
MIETGRPGMR KNGFLRNGRW AWAWLLACLC SWAAAAPPVR IAVVSLADDP RYDRRQLEKR 
YPGHPEGRPL DGAKVAAAES RFALDAIGVT LVLEPIEVRA AADIAATVSD LLRQNVQYFV
LDLPAPAVVQ ATRAAAAAQA LLLNVSADDD SLRGADCAPH LLHTLPSLRM RSDALLQYLA
ARKWRKGLLL HGPLPADRQQ QAAFLQSAKR FGVAWSAQRP FKLSNDPRER DLSNLNLLTT
GVDYDAIVVA DSAGEFARSL PYASALPRPV AGANGLTAQA WHWAWERNGG PQLSRRFGKS
AGRPMTSFDW AAWAAVKAVV AAVTLWPQAG FARQREALIS GEVVLDGFKG PRLSFRPWDG
QLRQPLFLAH PDGVIATAPL EGFLHPKNDL DTLGADAPET ACRKAR