Gene Veis_4963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4963 
Symbol 
ID4691671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand- 
Start bp5492212 
End bp5493234 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID639852699 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_999668 
Protein GI121611861 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0355569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC CCGTACTGCA GGTGCGCAAC CTGACCACCC GCTTCAAGAC CGAGCGCGGC 
GTCGTGACCC CCGTCGACGG CGTCTCGTTC GACGTGAACG CCGGCGAGAC GCTGGCCATC 
GTCGGCGAAT CGGGCTCGGG CAAGAGCGTG ACCTCGATGT CCATCCTGCG GCTGATCCCG 
TCGCCGCCGG GCCGCATCGA GGCCGGCGAG ATCTTGTTCG ACGGCAGGGA CCTGCTCAGG 
CTCAGCGAAG AGCAGATGCG CGCCATCCGT GGCGACCGCA TCGCGATGAT CTTCCAGGAC 
GCCATGTCCT CGCTGAACCC ATCGATCACG ATCGGCAAGC AGATCGCCGA GCCGACCACG 
CTGCACCGCA ATGCGTCCTG GGCCGAGGCC TACAGGAATG CCCGCGAACT GCTGGACAAG 
GTGCAGATCC CCGACGCCGA GAGCCGGCTC GGCGCTTATC CGCACCAGTT CTCGGGCGGC 
ATGCGCCAGC GCGCCATGAT CGCGATGGCC CTGGCCTGCG GGCCGCGGCT CATCATCGCG 
GACGAGCCCA CCACGGCGCT GGACGTGACG GTGCAGGCGC AGATACTGGA CCTGCTCAGG 
CAGCTCACGC GCCAGGCGCA GATGTCCATG ATCCTGATCA CGCACGACCT GGGCGTGGTC 
GCGCGCTACG CCGACCGCGT GGCCGTGATG TACGGCGGGC GCATCGTCGA GCAGGGCACG 
GCGCGCGAGA TCTTCAACCG GCCGGCGCAC CCCTACACGC GCGGCCTGCT GGCCTCGATC 
CCGCGCATCG ACAGCGACAC CGGCCAGCCG CTGCAGGCCA TCGAAGGCAT GCCGCCCGAT 
CTGTCGGCGC TGCCACCGGG CTGCGCGTTC GGCCCGCGCT GCCGGCTGGC GAGCGCCGCC 
TGCGTGGCCG CGCGCCCGCC GCTGACGGCA GTCAGCGCTG CCCGGCCGCC CGAAGGCGCT 
CACACCGCAG GCGAAGGTGC TCCAGTGAGC GCATCGCATG TCAAAGCCTG CTTCAACACC 
TGA
 
Protein sequence
MATPVLQVRN LTTRFKTERG VVTPVDGVSF DVNAGETLAI VGESGSGKSV TSMSILRLIP 
SPPGRIEAGE ILFDGRDLLR LSEEQMRAIR GDRIAMIFQD AMSSLNPSIT IGKQIAEPTT 
LHRNASWAEA YRNARELLDK VQIPDAESRL GAYPHQFSGG MRQRAMIAMA LACGPRLIIA 
DEPTTALDVT VQAQILDLLR QLTRQAQMSM ILITHDLGVV ARYADRVAVM YGGRIVEQGT 
AREIFNRPAH PYTRGLLASI PRIDSDTGQP LQAIEGMPPD LSALPPGCAF GPRCRLASAA 
CVAARPPLTA VSAARPPEGA HTAGEGAPVS ASHVKACFNT