Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4919 |
Symbol | |
ID | 4694701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 5439765 |
End bp | 5440895 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639852655 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_999625 |
Protein GI | 121611818 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGA AGTTGAAACT GATCGTGCTG GCCGCCGCCG TGGCGGCAAC TGCAGGCGTG GCCTTGGCAC AGGAGCAGGT GGTCAAGATC GGCCATGTGG CTCCGCTTTC CGGCCCCCAA GCCCACTACG GAAAGGACAA CGAAAACGGC GCCCGCATGG CCATCGAAGA ACTCAACACC CAGGGCATCA GCATCGGGGG CAAGAAAATC AAATTCGAGT TGCAGGCCGA AGATGACGCG GCCGACCCCA AGCAGGGCGC AGCCGTGGCG CAAAAACTGT GCGACTCCCA TGTCGCTGGC GTTATCGGTC ACCTGAACTC CGGCACCACC ATTCCGGCGT CCAAGATCTA CAACGACTGC GGCATTCCGA TGGTGACAGG CTCGGCGACC AACCCCAACC TGACCAAGCC GGGCTACAAA ACCACCTTTC GCATCATCGC CAGCGACAGC ACCCTGGGGG CAGGTCTGGC AGACTACGCG GCCGAGCAGC TCAAGCTCAA GACCGTCGCC GTCATCGACG ACCGCACCGC TTACGGCCAA GGTGTGGCCG AGGTGTTCAA AAAGACCGCC ATCGCCAAGG GCATCAAGGT GGTCGACGAG CAGTTCACGA CCGACAAGGC CACCGACTTC ATGGCCATAC TGACCGCCAT CAAGGCGAAA AATCCCGACG CCGTGTTCTA CGGCGGCATG GACCCCCAGG CCGGCCCGAT GCTGCGCCAA ATGGAACAGT TGGGCATGGT CCGCATGAAG TTCTTCGGTG GCGACGGCGC CTGCACGATC GAACTCATCA GGCTGTCGGG CAATGCCAAG ACCCTGGACA ACGTGATCTG CGCCGAAGGC GGTGCTTCGC TGGCCAAGAT GCCTGGCGGC CTGGCCTGGA AGGCCAAATA CGACGCCAAG TACCCCGGCC AGTACCAGAT TTACGCCCCC TACGTTTATG ACGCCACGAT GTTGATGGTC GACGCGATGA AGCGCGCCAA CTCCGCCGAC CCCAAGGTCT ACCTGAACGA GTTGGCCAAG TCCAACTTCA AGGGCGTGAC GACGACGATC GTTTTCGAAC CCAATGGCGA GATGAAGAAC CCTCCCTTCA CGCTGTACTC GTTCAAGGGC GGCAAGAAGA CCCCGCTGTA A
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Protein sequence | MQLKLKLIVL AAAVAATAGV ALAQEQVVKI GHVAPLSGPQ AHYGKDNENG ARMAIEELNT QGISIGGKKI KFELQAEDDA ADPKQGAAVA QKLCDSHVAG VIGHLNSGTT IPASKIYNDC GIPMVTGSAT NPNLTKPGYK TTFRIIASDS TLGAGLADYA AEQLKLKTVA VIDDRTAYGQ GVAEVFKKTA IAKGIKVVDE QFTTDKATDF MAILTAIKAK NPDAVFYGGM DPQAGPMLRQ MEQLGMVRMK FFGGDGACTI ELIRLSGNAK TLDNVICAEG GASLAKMPGG LAWKAKYDAK YPGQYQIYAP YVYDATMLMV DAMKRANSAD PKVYLNELAK SNFKGVTTTI VFEPNGEMKN PPFTLYSFKG GKKTPL
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