Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4822 |
Symbol | |
ID | 4691760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 5324427 |
End bp | 5325614 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639852562 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_999532 |
Protein GI | 121611725 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.623024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.429541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTC GCCGCATCGT CCTCAGCCGC AGCGCCGCCA TCGTGGGCGC CGCTGCCACA GGCTGGTTGC TGCCGGCCAC GGCGGGCGCG CAAAGCGCCA AGCTGCGTGT GGGCCTGATG CTGCCGTACA CCGGCACCTA CGCCCAACTC GGGGTGGCCG TCGAAAACGG TGTGCGCATG GCCATCGACC AGCAAGGCGG CAAGCTCGGT GGGCGCGAGA TCGAGTGGTT CAAGGTCGAC GACGAGTCCG AGCCCAGCAA GGCGGTGGAA AACGCCAGCA AACTGGTGCA GCGCGACAAG GTGCAGGTGC TGATCGGCAC GGTGCATTCG GGCGTGCAAA TGGGCATTCA GAAGGTGGCA CGCGAGACCG GCGTGCTCAG CCTGATCCCC AACGCCGGCG CGCATGCGGC CACCCGGGCA TTGTGCGCCC CGAATGTGTT CCGCACCTCT TTCACCAACG CGCAGATCAC GCTGGCGCTG GGTCCGGCGA TGGTCGCAAG AGGCCACAAA AAGGCCGTCT GGATCACCTG GAAGTACGCT GCCGGCGAGG AAGCCTTCGA GGGTTTCAAG CAAAGCTATC CGGCTGCCGG TGGCAGCATC ATCAAGGAAC TGGGCCTGCC CTTTCCGAAC GTCGAATTCC AGGCCCTGCT GACCGAGATC GCGGCCTTGC AGCCCGATGC CGTGGCCTGC TTTTTTGCCG GCGGCGGCGC TGCCAAGTTC ATCCGCGACT ACGCCGCTGC GGGTCTGAAG GACAAGATTG CGCTGTATGG CTCGGGCTTC CTCACCGAAG GGGTGCTCGA CGCCGCAGGC CCTGCCGCCG ACGGCATCAT CACCACGATG CACTACAGCG ACTCGCTGGA CACGCCGCGC AACAAGCAAT TTCGCATGGA GTACGCCAAG GCTTTCCGCA GCCAGCCCGA TGTGTATGCG ATGCAGGGCT ATGACACCGG CCTGCTGCTG GTGCACGGGG CCAATGCCGT CCAGGGCGAC ATGGAGGCCA AGCCAGCGCT GTACCGGGCG CTGGAGAGCG CCGTGATCGA CAGCCCACGC GGCCGATGGA CCATGAGCCG CGCCCACAAC CCGGTGCAGG ACATTTATCT GCGCCGGGTC GAGAACATGG AAAACAAGGT GATCGGCGTG GCCGCCAAGG CCCAGGCCGA CAGTGGTGCC GGGTGCCGGA TGGGCTAA
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Protein sequence | MSTRRIVLSR SAAIVGAAAT GWLLPATAGA QSAKLRVGLM LPYTGTYAQL GVAVENGVRM AIDQQGGKLG GREIEWFKVD DESEPSKAVE NASKLVQRDK VQVLIGTVHS GVQMGIQKVA RETGVLSLIP NAGAHAATRA LCAPNVFRTS FTNAQITLAL GPAMVARGHK KAVWITWKYA AGEEAFEGFK QSYPAAGGSI IKELGLPFPN VEFQALLTEI AALQPDAVAC FFAGGGAAKF IRDYAAAGLK DKIALYGSGF LTEGVLDAAG PAADGIITTM HYSDSLDTPR NKQFRMEYAK AFRSQPDVYA MQGYDTGLLL VHGANAVQGD MEAKPALYRA LESAVIDSPR GRWTMSRAHN PVQDIYLRRV ENMENKVIGV AAKAQADSGA GCRMG
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