| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4782 |
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| Symbol | |
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| ID | 4692657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5280400 |
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| End bp | 5280939 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639852522 |
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| Product | Tfp pilus assembly protein |
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| Protein accession | YP_999492 |
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| Protein GI | 121611685 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.26372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT ATTCCAGCCC CAAGAGTCAA CAAGGTTTCA CCTTGATCGA GCTGATGATC
GTGGTTGCGA TCATCGGCAT CCTGGCTTCC GTGGCCTTGC CGGCCTACCA GGACTACACC
AAGCGCGCCA AGGTATCCGA GGGCATTCTG GCCGGCTCGG CCTGTCGCAC CACCATTACC
GAAGTGATCC AATCCGCAGC CTCCAACGCG ATCATCGGAG CCAATGGCTG GGGCTGTGAA
ATATCGGAGA CCTCCAGCAC CAAGTACGTG AAGTCGGTCA CGACCGCCGC AACCAACGCT
GGCAATACAG GCGGCGCCGT CGTGACGGTG ACGATGCGAA ATATCGGAGA TGGCGTCGAT
GAAAAAACCA TCGTGCTGGC TCCCTGCTCG GAAAGCACGC AAGCCACTTT GGGGGAATGC
AAACAACCTG CATTGGGCGG GAATGTGGCC ACTTGGCTCT GCGGTCCCGG CTTGAGCAAC
GGTGTTTCCA TCAAGTACTT GCCCGGTTCG TGCCGCACTC CTGCCAGTGG TACCAGTTGA
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| Protein sequence | MKRYSSPKSQ QGFTLIELMI VVAIIGILAS VALPAYQDYT KRAKVSEGIL AGSACRTTIT
EVIQSAASNA IIGANGWGCE ISETSSTKYV KSVTTAATNA GNTGGAVVTV TMRNIGDGVD
EKTIVLAPCS ESTQATLGEC KQPALGGNVA TWLCGPGLSN GVSIKYLPGS CRTPASGTS
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