| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4685 |
|---|
| Symbol | |
|---|
| ID | 4694404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 5172443 |
|---|
| End bp | 5174041 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639852429 |
|---|
| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
|---|
| Protein accession | YP_999400 |
|---|
| Protein GI | 121611593 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCCC GCTCCCTCTT TCCCCGTCCC GAGAACGAGC CGACGTGCAA CTACGCGGAA
GGCACCGACG CACTGACGAA ACTCCGGACG CATCTCGCCG ACCGCACCGT GGTCGAGATC
CCCGCGGTCG TGGGCGGCAA GAAGATCTTC TCGGACGACG TCGAAATCAT CCATGCGCCG
CACGACCGCA GCCGCGTCCT GGCCCGCGTA CATCGGCCGA GCCAAGCGCA AGTGGACGAC
GCGATCCGCA GCAACCTCGA GGCCGCGCAC GATTGGTCGC GCATGGACTT CGCCGACCGG
GCTGCCATCA TGCATCGCGC CGCCGGCATC GTGCGCGGGC GGCTGCGCCA CCGCATCAAC
GCGGCGACCA TGCTGGGCCA GAGCAAGACC CTCGACGAGG CCGAGGCCGA CAGCGCCTGC
GAGCTGATCG ACTTCCTGCA CTTCAACACC TTCAACGCGC AGCAGATCGT GACGGACCAG
CCGCTGTCGG TGCAGGACGC GCAGAACCGC TGCGACTGGC GTCCGCTCGA AGGCTTCGTC
TACGCGGTGT CGCCCTTCAA CTTCACGGCG ATCGGCACCA ACCTCAGCTG CGCACCGGCG
CTCATGGGCA ACACGGTGCT GTGGAAACCG TCGAACAAGT CGACCTGGTC CAACTACCTG
TTCTTCGAAG CGCTCGAGGA AGCCGGCCTG CCGCCGGGCG TCATCAACTT CGTGCCTGGC
GAGGCCTCGC TCGTCACCGA CGCGGTGTTC GCATCACGGC ACTTCGCGGG TCTGCACTTC
ACGGGCTCGT CGGAGGTCTT CCGCTCGCTC TGGAAGCGCG CCGCCACAGG CATCGCCGCT
TATCGCACCT TCCCCCGGAT CGTCGGCGAG ACCGGCGGCA AGGACTTCGT GCTCGTGCAT
CGCTCGGCCG ATGCCCGCGA GGTCGCCGTC GCGCTGCTCA AGGGCTCATT CGGCTACCAG
GGCCAGAAGT GCAGCGCCGC ATCGCGCGCC TACATGCCCG CCAGCCTCTG GCCCAAGGTC
AAGTCGATCC TGTGCGACCT GATGGCGCAG GTGCGCATCG GCGACGTGGC CGACGTGTCC
ACCTTCATGG GCGCCGTGAT CGACCAGAAC TCGTATCGCC GTCTGGGCGA TGCGCTCGGT
GCCGCCAAGG CCGATTCGCA GGTCAAGGTG GTGGCGGGCG GCACCTTCCA GGACGAGGTC
GGCTATTTCG TGCAGCCGAC CGTGCTGCAG GTCGAGGACC CGAGCCATCG GCTCATGAAG
GACGAGTTGT TCGGGCCGGT GCTGTCGGTG TTCGAGTACC CCGATTCGGC CTGGACCGAA
GTGCTGGAGG CGGTCGACTC GGTATCCGAC TATGCGCTGA CCGGCTCGAT CTTCTGCACC
GACCGTGCCG CGCTCAAGCA GGCGCAGGAC GCGCTACTGC ATGCGGCCGG CAACCTCTAC
CTCAACGACA AGCCGACGGG CGCGATCGTG GGCCAGCAGC CCTTCGGCGG AGGCCGTGCG
AGCGGTACCA ACGACAAGGC CGGTTCGTGG ATGAACCTGC TGCGCTGGAC CTCGCCGCGC
GTGGTCAAGG AAACCTACGC GCCGCCGCGC GGTCTCTGA
|
|---|
| Protein sequence | MNSRSLFPRP ENEPTCNYAE GTDALTKLRT HLADRTVVEI PAVVGGKKIF SDDVEIIHAP
HDRSRVLARV HRPSQAQVDD AIRSNLEAAH DWSRMDFADR AAIMHRAAGI VRGRLRHRIN
AATMLGQSKT LDEAEADSAC ELIDFLHFNT FNAQQIVTDQ PLSVQDAQNR CDWRPLEGFV
YAVSPFNFTA IGTNLSCAPA LMGNTVLWKP SNKSTWSNYL FFEALEEAGL PPGVINFVPG
EASLVTDAVF ASRHFAGLHF TGSSEVFRSL WKRAATGIAA YRTFPRIVGE TGGKDFVLVH
RSADAREVAV ALLKGSFGYQ GQKCSAASRA YMPASLWPKV KSILCDLMAQ VRIGDVADVS
TFMGAVIDQN SYRRLGDALG AAKADSQVKV VAGGTFQDEV GYFVQPTVLQ VEDPSHRLMK
DELFGPVLSV FEYPDSAWTE VLEAVDSVSD YALTGSIFCT DRAALKQAQD ALLHAAGNLY
LNDKPTGAIV GQQPFGGGRA SGTNDKAGSW MNLLRWTSPR VVKETYAPPR GL
|
|---|
| |