Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4485 |
Symbol | |
ID | 4694569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4962326 |
End bp | 4963123 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639852232 |
Product | putative transmembrane protein |
Protein accession | YP_999204 |
Protein GI | 121611397 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.219271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCCG CCCCACTGCC CCTGGTTTCT GCCCTGCTGC TGGCAGCCCT GCTGGCTGCA TGCTCGAGCA CCACCGAAGA CCGGACGGCG GGCTGGAGCA CCGAACGCAT CCGCGCCGAA GCGCAGGACG AGATGAGCAG CGGCGCCTAT GACAAGGCCG TGCCGCTGCT GGAAAAGCTC GAAGGCCGCG CTGCCGGCAC GCCACTGGCG CAGCAGGCCC AGATCGACAA GGCCTATGCA CACTACAAGT CCGGCGAAAA AGCCCAGGCC GTGGCCACGC TGGATCGCTT CATGAAGCTG CACCCCGTCA GCCCGGCGCT GGACTATGCG CTGTACCTCA AGGGCCTGGC GAACTTCAAC GACAACCTGG GCCTGTTCTC GTTCATCTCG CGCGAAGACC TGTCCGAGCG CGACCAGCAG GCCGCCAAAG ACTCCTTCGA GGCGTTCAGG GAACTCGTCA ACCGCTTTCC GCAATCGCGC TACGCGCAGG ATGCACGCCA GCGCATGACC TATATCGTGA ACTCGCTGGC GCAGTATGAG GTGCATGTGG CGCGCTACTA CTACCTGCAC GGCGCCTATG TGGCGGCCAT CGGCCGCGCC CACTTGGCCC TGTCCGACTA CCAGGGCGTT CCGGCGCAGG AAGAGGCGCT GTACATCCTG ATCCAGTCCT ACGATGCGCT GGGCATGACC GCGCTGCGCG ACGACGCGCG CCGGGTGATG GACAAGTCCT ACCCGCAAAG CAGCTTCATG AGCGGCGGCT TCAAGCGCCG GCAGGAGCCG TGGTGGAAGA TCTGGTAG
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Protein sequence | MLPAPLPLVS ALLLAALLAA CSSTTEDRTA GWSTERIRAE AQDEMSSGAY DKAVPLLEKL EGRAAGTPLA QQAQIDKAYA HYKSGEKAQA VATLDRFMKL HPVSPALDYA LYLKGLANFN DNLGLFSFIS REDLSERDQQ AAKDSFEAFR ELVNRFPQSR YAQDARQRMT YIVNSLAQYE VHVARYYYLH GAYVAAIGRA HLALSDYQGV PAQEEALYIL IQSYDALGMT ALRDDARRVM DKSYPQSSFM SGGFKRRQEP WWKIW
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