Gene Veis_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4399 
Symbol 
ID4693886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4847239 
End bp4849422 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content70% 
IMG OID639852148 
ProductTPR repeat-containing protein 
Protein accessionYP_999120 
Protein GI121611313 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.516213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGACA GCCACCCGGC CCCCGGCGCC ACGGTCGATG GCCGGTTCCA GCACGCGCTG 
CAAAGCGCCG ATTGGCCCTT GCTGGCGCGC CTGTGCCAGC GGGCGTTGCG CAAAAACCCG
CGTGACCTGC CGGCCACGCG GCTGCTCGGC CATGCGCTGG AACGCCTGGG CAAGACTGCC
GCGTGCGGGC AGGTCTACCG CCGCGGCGCG CTGCTGTGGC CCAACGATGC CGAGCTGCTG
ATCAACTACG CCAGCATGTT GCTCAAGCAT GCGCACACTG CGCAGGCGCT GCCGGTTCTG
GAGCAGGTCT GCGCGCTGCG GCCTGACAAG GCGGTGTGCT GGCTCCAACT GTCGCAATGC
TGCTATTTGC TGACGCTGCA CGAAAGGGGT TTGCAAGCGG CCGAACGAGC CGCTGCGCTG
GCCACGGAGC CGGGCGAAAA ATCGGCCGCG CTGACCCAGA AAGCAATCCA TGGCCGCGAG
CTGGGGCAGG TCCGGCAGGC GGTGCAGGAC TGTCTGCAAG CCATTGCGCT GACGCCCGGG
GATCTGTCGA ACCACACCAA CCGGCTGCTG TTCATGCTGG CCGACCCGCA GGCCGACGCC
GCCAGCCTGG CGCAGGCCGC GCGCGACTAT GCGGCGGTCG TCGAGCCGCC GCTGAAACCG
CACTGGCCCG GCTTTGCCGA GCACCAAGGC GCGCCATGGC GCCGGCTGCG CGTCGGGTTT
TTGTCGCCTG ATTTCCGCAC GCACTCGGTG ATGTACTTCG TCGAGGGCTT GCTGGCGCAG
TTGGACCGGC GCCAGTTCGA GGTCTTTGCC TTTTATCTGT TCCCGCGCGA CGACCCGGTG
ACCGAACGGG TGCGGCGCCA TGCCGATCGC TTCGTGCGCC TGGCGGGGCT GGGCGCCGAG
CAGCAGGCGC AGGCGATTCG GGCGCAGCGC ATCGACATCC TGATCGACCT GGCCGGGCAC
ACCGGCTACA ACGGCTTGCA GGCCATGGCC CACAAGGCGG CTCCGGTGCA GGTGTCGTGG
CTCGGGTTTC CGGCGACGAC CGGGCTGCAG GCCGTGGATT ACAAGCTCAG CGACGAGATC
ACCGACCCGC CCGAGGCCCA GGCGCATTAC ACCGAGCAGT TGTACCGCCT GCCGACGCTG
TTTGCCTGCT ACCGCCCGAT GAGCCGACAC CCCCTTTGGC GCTACCAGCC GCGCTACCAG
GTGCAGCCCA CGCCGGCGCT GGACAAGGGC CACATCACCT TTGGCTGCTG CAACAACCTG
GGCAAGCTCG GCGACGAAGT GCTGGCGCTG TGGGGCCAGT TGCTGCAAGC GCTGCCGGAC
GCGCGCCTGC TGATCGAGGG CAAGAACCTC GATGGCCCGG ACTTCGCCGG CGCCTACCGC
CAGCGCTGCC AGGGCCTGGG GCTGGACCCC GAGCGGCTGG AACTGGTGGC GCAGCAGGGC
GACAACCAGT ACCTGACCTA CCACCGCATC GATATCGCGC TCGACCCCTT TCCGCTGGTC
GGCGGCACGA CCACGTTCGA CGCGCTGTGG ATGGGCCTGC CCGTGGTCTC GATGGTCGGC
CAGAGCTTCA AGAGCCGCAT GGGCCTGGGC CTGCTGAGCT ATCTGGGGCG CACCGAATGG
CTGGCCGCAA CGCCCGCCGA CTATCTGCGC ATTGCCTGCG CGCTGGCCGC CGACAGGCAG
GCGCTGAACC GCCTGCGCCT GGGATTGCGC GCCGAGGTCG AGCGCTCGGT GCTGATGCGC
GAGGACCTCT TCAACCACCA TTTCGGCGAG GGCCTGCGCG CGATGTGGCT GCTGTGGCTG
GCCCGGGCCA AGCACCCGGA TGACGCCCAG GCCCAGGCGC AGGCCCTGGA CGATTGGCTG
CCCGGCTTGC CCGACGCCTG GCGCCAGCCC CCCGCGCCGG GGGTGGGGCT GGGGCCGGGC
CAGCGCATCA GCCTGGCGCA GGCGCACCAG CGCTTGCAGG CGCTGGTGGC CAAAGCCCGG
GCCAGCACGG CGGCCATGCC CGCAGGCGCC ACCATCACCG GCCGCCACTG GAAGGCGCTG
ACCCTGCTGG CCGAAACCGT GCTGAACGCG GTGCCGAATG ACCCCGTGGC GCTGGCCTGC
CTGGCCGAGG TGGAGCACGC CCATGGTCAC AGCGAATTTG CCGTGACCTA CCTGTGGCAT
GCGACGCAGG CGATGGGATC GTGA
 
Protein sequence
MQDSHPAPGA TVDGRFQHAL QSADWPLLAR LCQRALRKNP RDLPATRLLG HALERLGKTA 
ACGQVYRRGA LLWPNDAELL INYASMLLKH AHTAQALPVL EQVCALRPDK AVCWLQLSQC
CYLLTLHERG LQAAERAAAL ATEPGEKSAA LTQKAIHGRE LGQVRQAVQD CLQAIALTPG
DLSNHTNRLL FMLADPQADA ASLAQAARDY AAVVEPPLKP HWPGFAEHQG APWRRLRVGF
LSPDFRTHSV MYFVEGLLAQ LDRRQFEVFA FYLFPRDDPV TERVRRHADR FVRLAGLGAE
QQAQAIRAQR IDILIDLAGH TGYNGLQAMA HKAAPVQVSW LGFPATTGLQ AVDYKLSDEI
TDPPEAQAHY TEQLYRLPTL FACYRPMSRH PLWRYQPRYQ VQPTPALDKG HITFGCCNNL
GKLGDEVLAL WGQLLQALPD ARLLIEGKNL DGPDFAGAYR QRCQGLGLDP ERLELVAQQG
DNQYLTYHRI DIALDPFPLV GGTTTFDALW MGLPVVSMVG QSFKSRMGLG LLSYLGRTEW
LAATPADYLR IACALAADRQ ALNRLRLGLR AEVERSVLMR EDLFNHHFGE GLRAMWLLWL
ARAKHPDDAQ AQAQALDDWL PGLPDAWRQP PAPGVGLGPG QRISLAQAHQ RLQALVAKAR
ASTAAMPAGA TITGRHWKAL TLLAETVLNA VPNDPVALAC LAEVEHAHGH SEFAVTYLWH
ATQAMGS