| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4373 |
|---|
| Symbol | |
|---|
| ID | 4694929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4822066 |
|---|
| End bp | 4824516 |
|---|
| Gene Length | 2451 bp |
|---|
| Protein Length | 816 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639852120 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_999094 |
|---|
| Protein GI | 121611287 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.574007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.577886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGAT ATACCCCCCT GCCAGCCATC GCCCTGAACC TGCCGCTGTT GCCGCTGCGC
GATGTGGTGG TGTTCCCCCA CATGGTCATC CCGCTGTTCG TCGGCCGCCC CAAGAGCATC
AAGGCGCTGG AAAAAGCGAT GGAGGCCGAC CGCCGCATCA TGCTGGTGGC GCAGAAAGCG
GCGGCCAAGG ACGAGCCCTC GGTGTCGGAC ATGTTCGATG TCGGCTGCGT CTCGACCATC
TTGCAGATGC TCAAGCTGCC CGACGGCACG GTCAAGGTGC TGGTCGAAGG CCAGCAGCGT
GCCCAGGTGG CAGCGATCGA AGACGCCCAG ACCCATTTCA CGGCCACCGT GACACCGGTC
GAGGCGAGCA AGCCCGGCGA GACCGAGACC CGCATGCCCT CCCGGGAGAT AGAAGCCCTG
CGCCGCGCGG TAATGCAGCA GTTTGACCAA TACGTCAAGA TCAACAAGAA GATTCCGCCG
GAGATCCTGA CCTCGATCGC CAGCATCGAT GATCCCGGCC GCCTGGCCGA CACCATTGCC
GCCCATCTGC CGCTCAAGCT GGAAAACAAA CAGTTGGTGC TGGACCTGGC CGACGTGAAA
GCCCGTCTGG AATACCTGTT CGAGCAGCTC GACCGCGAGG TCGACATCCT GAACGTGGAC
CGGAAAATCC GCGGGCGCGT GAAGCGCCAG ATGGAAAAGA ACCAGCGCGA CTTCTACCTG
AACGAGCAGG TCAAGGCCAT ACAAAAGGAA CTCGGCGAGG GCGAAGAAGG CGCCGACATC
GACGAGATCG AGAAAAAAAT CAAACTCGCC AAGATGCCCG CCGAAGCGCG CAAGAAGGCC
GATGGCGAGC TCAAAAAACT CAAGCTGATG TCGCCCATGT CTGCCGAGGC GACCGTGGTG
CGCAACTACA TCGACGTGCT CTCCAACCTG CCCTGGAGCA AGAAAACCAA GATCAAGTAC
GACCTGGTCA ATGCCGAGGA GGTGCTCAAC GCCGACCACT TCGGCCTGGA CAAGGTCAAG
GACCGCATCC TGGAATACCT GGCCGTGCAG CAGCGCGTGG ACAAGGTCAA AGCGCCGATC
CTGTGTCTGG TCGGCCCGCC CGGCGTGGGC AAGACCTCGC TGGGCCAGTC GATCGCCCGG
GCCACCGGCC GCAAATATGT GCGCATGGCC CTGGGCGGCA TGCGCGACGA GGCCGAGATT
CGCGGCCACC GCCGCACCTA CATCGGCGCG CTGCCGGGCA AGGTGCTGCA AAGCCTGTCC
AAGGTCGGCA CGCGCAACCC GCTGTTCCTG CTCGACGAGA TCGACAAACT GGGCACCGAC
TTCCGGGGCG ACCCCGCCAG TGCGCTGCTG GAGGTGCTGG ATCCGGAACA GAACCACACC
TTCGGCGACC ACTATGTGGA GGTCGACTTC GACCTCTCGG ACGTGATGTT CGTCGCCACC
TCGAACTCGA TGAGCATCCC GCCCGCGTTG CTCGACCGCA TGGAAGTCAT CCGCCTGTCG
GGCTACACCG AGGACGAAAA GATCAGCATC GCGATGAAGT ACCTGCTGCC CAAGCAGCTC
AAGAACAATG GCGTCAAGGA CGAGGAACTG CTGGTCACCG AGGCCGCCGT GCGCGACATG
GTGCGCTACT ACACCCGCGA GGCCGGCGTG CGCTCGCTCG AACGCGAGCT GTCCAAGATC
TGCCGCAAAC TGGTCAAGGG CCTGCAACTC AAGAAGCTCG AACCGCAGGT GGTGCTGACA
GCCGACAACC TGCCCGACTA CCTGGGCGTG CACAAATACA CCTACGGCCG CGCCGAACTG
CAAAACCAGG TCGGGCAGGT GGTGGGCCTG GCCTGGACCG AAGTCGGCGG CGACCTGCTG
ACCATCGAAG TGGCCACCAT GCCCGGCAAG GGCGTGATCA CGCGCACCGG CTCGCTCGGC
GATGTGATGA AGGAATCCGT CGAGGCGGCA CGCACGGTGG TGCGCAGCCG CTCGCGCATG
CTCGGCATCA AGGATGAGAC CTTCGAGAAG CGCGACATCC ATATCCATGT GCCGGACGGC
GCCACGCCCA AAGACGGCCC GAGCGCCGGC GCCGCGATGA CCACGGCGTT CGTTTCGGCC
CTCACCGGCA TCCCCGTGCG CGGCGATGTG GCGATGACCG GCGAAATCAC GCTGCGCGGC
GAAGTCACGG CCATTGGTGG CCTGAAGGAA AAACTGCTGG CCGCATTGCG CGGCGGCATC
AAGACCGTGC TGATCCCCCA GGAAAATGTC AAGGACTTGC AGGAAATTCC GGACAACGTC
AAAAACGGCC TGGAGATCGT GCCCGTGCGC TGGATCGACA AGGTGCTGGA AGTGGCGCTG
GAACGCAAGC CCGTGCCGCT GACAGACGAA GAAGTGACCG TGATGGTCGC CGCCGCTGCG
GCAGACAAGA CCGTGGCCGC AGCGGTGCTC ACCGATGGCC TGAAGCATTG A
|
|---|
| Protein sequence | MPGYTPLPAI ALNLPLLPLR DVVVFPHMVI PLFVGRPKSI KALEKAMEAD RRIMLVAQKA
AAKDEPSVSD MFDVGCVSTI LQMLKLPDGT VKVLVEGQQR AQVAAIEDAQ THFTATVTPV
EASKPGETET RMPSREIEAL RRAVMQQFDQ YVKINKKIPP EILTSIASID DPGRLADTIA
AHLPLKLENK QLVLDLADVK ARLEYLFEQL DREVDILNVD RKIRGRVKRQ MEKNQRDFYL
NEQVKAIQKE LGEGEEGADI DEIEKKIKLA KMPAEARKKA DGELKKLKLM SPMSAEATVV
RNYIDVLSNL PWSKKTKIKY DLVNAEEVLN ADHFGLDKVK DRILEYLAVQ QRVDKVKAPI
LCLVGPPGVG KTSLGQSIAR ATGRKYVRMA LGGMRDEAEI RGHRRTYIGA LPGKVLQSLS
KVGTRNPLFL LDEIDKLGTD FRGDPASALL EVLDPEQNHT FGDHYVEVDF DLSDVMFVAT
SNSMSIPPAL LDRMEVIRLS GYTEDEKISI AMKYLLPKQL KNNGVKDEEL LVTEAAVRDM
VRYYTREAGV RSLERELSKI CRKLVKGLQL KKLEPQVVLT ADNLPDYLGV HKYTYGRAEL
QNQVGQVVGL AWTEVGGDLL TIEVATMPGK GVITRTGSLG DVMKESVEAA RTVVRSRSRM
LGIKDETFEK RDIHIHVPDG ATPKDGPSAG AAMTTAFVSA LTGIPVRGDV AMTGEITLRG
EVTAIGGLKE KLLAALRGGI KTVLIPQENV KDLQEIPDNV KNGLEIVPVR WIDKVLEVAL
ERKPVPLTDE EVTVMVAAAA ADKTVAAAVL TDGLKH
|
|---|
| |