| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4352 |
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| Symbol | |
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| ID | 4693789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 4795233 |
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| End bp | 4797038 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639852097 |
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| Product | succinate dehydrogenase, flavoprotein subunit |
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| Protein accession | YP_999073 |
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| Protein GI | 121611266 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.602613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.276031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACT CGCAAGCCCA CATCACCCGG CGCAAGTTTG ATGTCGTCAT CGTCGGTGCC
GGCGGCTCCG GCATGCGCGC CGCGCTGGAA CTCGCGCGCG CCGGCCTGAA CGTGGCCGCG
CTGTCCAAGG TATTTCCCAC CCGCTCGCAC ACCGTGGCCG CGCAAGGCGG TGTCGGTGCC
GCGTTGGGCA ATATGGGCGA GGACAACTGG CACTACCACT TCTACGACAC CGTCAAAGGC
TCGGACTGGC TCGGCGACCA GGACGCCATC GAGTTCATGT GCCGCCAAGC CCCTCAGGTG
GTGTACGAAC TGGAGCATTT CGGCATGCCG TTCGACCGCA ACCCCGATGG CAGCATCTAC
CAGCGCCCGT TCGGCGGCCA CACCGCCAAC TACGGCGAAA AGCCCGTGCA GCGCGCCTGC
GCCGCGGCCG ACCGCACCGG CCACGCGATG CTGCACACGC TGTACCAGCA AAACCTCAAG
GCCAGGACCA ACTTCTTTGT CGAATGGATG GCCCTGGACC TGATCCGCGA CGCCGACGGC
GACGTGGTCG GCGTCACCGC GCTCGAAATG GAAAGCGGCG AACTGCATAT CCTGCAAGCC
AAGACCGTGT TGCTGGCCAC CGGCGGCGCG GGCCGCATCT TCGCGGCCAG CACCAACGCC
TTCATCAACA CCGGAGACGG CCTGGGCATG GCGGCGCGCG CCGGCGTCCC GCTGCAAGAC
ATGGAGTTCT GGCAGTTCCA CCCCACCGGC GTGGCCGGCG CCGGCGTGCT GCTGACCGAA
GGCTGCCGGG GCGAAGGCGC GATCCTGGTC AACAGCAAAG GCGAGCGCTT CATGGAGCGC
TATGCGCCCA CCTACAAAGA CCTGGCGCCG CGCGATTTCG TCTCGCGCGC GATGGACCAG
GAAATCAAGG AAGGCCGTGG CTGCGGCCCG AACAAAGACT ACGTGCTGCT CAAGCTCGAC
CACCTGGGCG CGGAGACCAT CCACAAGCGC CTGCCCTCGG TGTACGAAAT CGGCGTCAAC
TTCGCCAACG TCGACATCAC CCGCGAGCCG ATCCCGGTGG TGCCCACCAT CCACTACCAG
ATGGGCGGCG TGCCGACCAA CATCCACGGC CAGGTCGTGA CCCACGACGG CACGGCCAAC
CAGGTCGTCA ACGGCCTGTA CGCGGTCGGC GAATGCTCCT GCGTGAGCGT GCACGGCGCC
AACCGCCTGG GCACCAATTC GCTGCTCGAC CTGCTGGTGT TCGGCAAGGC CGCTGGCCGC
CACATCGTCG AGTTCAACCA GCGCCAGCGG GAGCACAAAC CCCTGCCCGC GAATGCCGCC
GAGCGCACGC TCGAGCGGCT GAACCAACTC GACCAATCCA GCGGCGGCAT CTACTCGCAG
ACCCTGGCCG GCGACATCCG CGCCGCGATG CAGCAGCACG CCGGCGTGTT CCGCACCCAG
GCCGGCATGG ACGAAGGCGT GCGCAAAATC GCCGCGCTGC GCGCGCAGGC GGGCGCCGTC
ACGCTGCAAG ACAAATCCCG GGTGTTCAAC ACGGCGCGTG TCGAAGCGCT GGAAGTGGAC
AACCTGATCG AAGTCGCCCA AGCGACCATG GTCTCGGCCG CCGCCCGCAA GGAATGCCGT
GGCGCGCACA CGGTGCACGA CTACGAGCAC CCCGACGACC ACCCGACCGC ACCGCTGGGC
CGCAACGACG CGCAGTGGCT CAAGCACAGC CTCTGGCACA GCGCCGGCAA CCGGCTCAGC
TACAAGCCGG TGAACCTCAA GCCGCTGACG GTGGACAGCA TTCCTCCGAA GGTCCGGACA
TTCTGA
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| Protein sequence | MSYSQAHITR RKFDVVIVGA GGSGMRAALE LARAGLNVAA LSKVFPTRSH TVAAQGGVGA
ALGNMGEDNW HYHFYDTVKG SDWLGDQDAI EFMCRQAPQV VYELEHFGMP FDRNPDGSIY
QRPFGGHTAN YGEKPVQRAC AAADRTGHAM LHTLYQQNLK ARTNFFVEWM ALDLIRDADG
DVVGVTALEM ESGELHILQA KTVLLATGGA GRIFAASTNA FINTGDGLGM AARAGVPLQD
MEFWQFHPTG VAGAGVLLTE GCRGEGAILV NSKGERFMER YAPTYKDLAP RDFVSRAMDQ
EIKEGRGCGP NKDYVLLKLD HLGAETIHKR LPSVYEIGVN FANVDITREP IPVVPTIHYQ
MGGVPTNIHG QVVTHDGTAN QVVNGLYAVG ECSCVSVHGA NRLGTNSLLD LLVFGKAAGR
HIVEFNQRQR EHKPLPANAA ERTLERLNQL DQSSGGIYSQ TLAGDIRAAM QQHAGVFRTQ
AGMDEGVRKI AALRAQAGAV TLQDKSRVFN TARVEALEVD NLIEVAQATM VSAAARKECR
GAHTVHDYEH PDDHPTAPLG RNDAQWLKHS LWHSAGNRLS YKPVNLKPLT VDSIPPKVRT
F
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