Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4290 |
Symbol | |
ID | 4694720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4732732 |
End bp | 4734324 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639852036 |
Product | extracellular solute-binding protein |
Protein accession | YP_999012 |
Protein GI | 121611205 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00787986 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTC TTGCCCGTTG CACATGCCGC GCCGCCTTGC TCGGCATCGG CGCCCTGCTC TCGCTGGCGC AGCCGGCCCT GGCGGCCGAT CAACCCAAGC GCGGCGGCAC GCTGGTGATC GGCAGCACAC AGACGCCGCG CCACCTGAAC GGCGCGGTGC AGTCGGGCGT CGCCACCGGC CTGTCCTCGA CGCAGATCTT CGCCAGCCCG CTGCGCTTCG ACGGGCAGTG GAACCCGCAG CCTTACCTGG CCCAATCGTG GCGGTTGGCC GACGACGGCA AATCGCTCAC GCTCGGGCTG CGCAAGGACG CGCTGTTTCA CGACGGCAAG CCGGTCACCT CGGCCGATGT GGCTTTTTCG ATCATGGCGA TCAAGGCCAA CCACCCGTTC AGCACCATGT TCGGCCCGGT CGAGAAGGTC GACACGCCCG ACCCGCACAC CGCCATCATC CGCATGAGCG TGCCGCACCC GGCCATCGTG CTGGCGATGT CGCCAGCCCT TTGCCCGATT CTTCCCCGGC ATATCTACGG CGACGGCCAG GACCTGAAGA ACCACCCGCG CAACAGCACC GACCCGGTAG GCTCGGGCCC GTTCCGGGTC ACCGAATTCC AGCCGGCGCA GCGCGTGGTG CTCGAGCGCT TCGAGCGCTT TTTCCTGCCC GGCCGGCCCT ATCTGGACAA GGTGATCGTC AGCATCACGC TCGACCGGGC CAGTCTGGTC CTGGGGCTCG AGCGCGGCGA CATACAGATG CTGCCCTTCG TCACGCAGTC CACCGACCTC AAGCGCCTGG CCAGCGACCC GAGGCTGTCG CTCACGTCCA AGGGCTATGA CGGCATGGGC CCGCTCAACT GGCTGGCCTT CAACACGGCA AAGCAGCCGC TGTCGCACTT GCAGGTGCGC AAGGCCATCG CCACGGCCAT CGACAAGAAC TTCATCACCC GGGCGCTGAT GGGCGGCTTT GCCACCGTGT CCGACGGGCC GCTGGTGGCC AACAGCCCGT TTGCCGCGTC CGACCTGGTG CGCTACCCGT TCGATCTGAA AAAAGCCGGC GCGATGCTCG ACGCGGCGGG CTACAAGGCC GGCGCGAACG GCGAGCGCTT CAGGCTCGGC CTGGACTACC TGCCCGGCAA CGAAGACCAG CAAAAGAACG TGGCCGAGTA CATCCGCGGC CAGCTCAAGA AGGTGGGCAT CACGGTCGAG ATGCGCGCCT CGGCCGACTT TCCGGCCTGG GCCCGGCGGA TGGCCGCGCA CGACTTCGAC CTGTCGATGG ACATGGTGTT CAACTGGGGC GACCCGGTCA TCGGCGTGCA CCGCACCTAC CTGTCGAGCA ACATCAAACC CATCGTCTGG ACCAACACCC AGTCCTACGC CAACCCCAAG GTCGACGAAT TGCTCCACAC CGCCGGCAGC CTGATCGACC CGGCGCAGCG CAAAGCCCAT TACGCCGCCT TCCAGAAGAT CGTGACCGAC GAGCTGCCGA TCCTGTTCAT CAACCAGGTG CCCTACCACA CCATCACCAG CAAGAAGCTG GCGCAGGTGC CGACCTCGAT CTGGGGGCCG ATGTCGCCGC TGGACGAGGT CTACTACAAG TGA
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Protein sequence | MPLLARCTCR AALLGIGALL SLAQPALAAD QPKRGGTLVI GSTQTPRHLN GAVQSGVATG LSSTQIFASP LRFDGQWNPQ PYLAQSWRLA DDGKSLTLGL RKDALFHDGK PVTSADVAFS IMAIKANHPF STMFGPVEKV DTPDPHTAII RMSVPHPAIV LAMSPALCPI LPRHIYGDGQ DLKNHPRNST DPVGSGPFRV TEFQPAQRVV LERFERFFLP GRPYLDKVIV SITLDRASLV LGLERGDIQM LPFVTQSTDL KRLASDPRLS LTSKGYDGMG PLNWLAFNTA KQPLSHLQVR KAIATAIDKN FITRALMGGF ATVSDGPLVA NSPFAASDLV RYPFDLKKAG AMLDAAGYKA GANGERFRLG LDYLPGNEDQ QKNVAEYIRG QLKKVGITVE MRASADFPAW ARRMAAHDFD LSMDMVFNWG DPVIGVHRTY LSSNIKPIVW TNTQSYANPK VDELLHTAGS LIDPAQRKAH YAAFQKIVTD ELPILFINQV PYHTITSKKL AQVPTSIWGP MSPLDEVYYK
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