| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4284 |
|---|
| Symbol | |
|---|
| ID | 4694033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4725599 |
|---|
| End bp | 4726417 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639852031 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_999007 |
|---|
| Protein GI | 121611200 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0949532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGC CGGCCGGCGC CAAGCCCAAG ACCAGCGCCT TCGAGATGCC GGGCGAGGGG
CCCAGCCTGG CCATCAGCGT GGCCACGGTG CTGGTGCTGT TCGCGCTGTG GTTCATCGTC
ACGAACACGG GCCGGGTCTC GCCGCTGTTC CTGCCGACGC CGCAGGCGGT GTTTGCGCAG
TTTTGCCAAT ACCTGACCGG CCAGGCCAAC GACAAGCCGC TGTGGCAGCA TTTCCTGGCC
AGCATGTTGC GCGTGTTCTC GGCCTTCTTG CTGGCCTGCG CCACGGCCAT ACCGGTGGGC
ATTGCGATGG GCATGAGCCG CTGGTGGCGC GGCATCGTCG ATCCGCCGCT GGAGTTTTAT
CGGCCGCTGC CGCCGCTGGC CTACCTGCCG CTGATCATCA TCTGGTTCGG CATCGATGAA
CTGCCCAAGG TGCTGCTGAT CTTTCTGAGC TGTTTCGCGC CGCTGGCGCT GGCCGCGCGG
CAGGGCATGC GCAGCGCGTC GCAGGAGCAG ATCAATGCCG CGTATTCGCT GGGCGCAAGC
TACATGCAAC TGATCGGCCA TGTGATCTTG CCGTCGGCGC TGCCCGAGAT CCTGGTGGGC
ATGCGCATCG CCATCGGCTT TGGCTGGACC ACGCTGGTGG CTGCCGAGAT GGTGGCCGCC
GACATTGGCC TGGGGCAGAT GGTGCTGAAT GCGTCGAACT TCCTGCGCAC CGACATCGTC
ATCATGGGCA TCATCGTCAT CGGGGTGGTG GCGTACCTGT TCGACCTGCT GATGCGCTGG
CTCGAGCGCC GTCTGGTGCC CTGGAAAGGG CGCATGTAG
|
|---|
| Protein sequence | MAAPAGAKPK TSAFEMPGEG PSLAISVATV LVLFALWFIV TNTGRVSPLF LPTPQAVFAQ
FCQYLTGQAN DKPLWQHFLA SMLRVFSAFL LACATAIPVG IAMGMSRWWR GIVDPPLEFY
RPLPPLAYLP LIIIWFGIDE LPKVLLIFLS CFAPLALAAR QGMRSASQEQ INAAYSLGAS
YMQLIGHVIL PSALPEILVG MRIAIGFGWT TLVAAEMVAA DIGLGQMVLN ASNFLRTDIV
IMGIIVIGVV AYLFDLLMRW LERRLVPWKG RM
|
|---|
| |