Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4254 |
Symbol | |
ID | 4694055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4692410 |
End bp | 4693993 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639852001 |
Product | extracellular solute-binding protein |
Protein accession | YP_998977 |
Protein GI | 121611170 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.340537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.123719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATCG CCAGAAGACC CTTCGGGATA TCGCTGATCG CTGCTGCCCT GTCGTTGACC AGTTCCACCT TCGTCTTGGC CCAGAGCCAG CCGACGCCCG GCGGAACGCT CAACATGCTG GTGCAGCCAG AACCTCCGTC GCTGATGCTG GGGCTCAACC AACTGGGCCC AACGCAGTTC GCGGCGAGCA AGATCTACCA GTCGCTGCTG ACCTACGGCC CTGATCTGAA GCCGCTGCCC TCCCTGGCGC AGTCCTGGAC CATCTCGCCG GACGGGTTGA CCTATGCCTT CGTGCTTCAG AAGGACGTCA AGTGGCACGA CGGCAAGCCG TTCACCTCGG CCGACGTTGT GTTCTCTACC GACAAATTCC TGCGTGAGGT TCATCCGCGC ACGCGCGCAC TGATGAACCA GCGCGTCGAA TCGGTGAAGG CGGACGGGGA TGACAAGGTG ATCTTCAAAT TGAAGCAGCC GTTCAATGCC TTCATCAGCG CCTTCGAAGT GTCGACCATG CCGATGATTC CCAAGCACAT CTACGAAGGC ACGAACTACC GCACCAATCC GGCGAACAAC ACGCCCGTCG GCACGGGGCC GTTCATGCTC AAGGAATGGA AGCGTGGCTC CTACATCCAC CTGGTGAAGA ACCCGAACTA TTTCAAACCC GGGCTTCCCT ACCTCGACGA AATCTACCTG CTGGTGATTC CCGATGCGGC CTCGCGTGCC GTGGCCTTCG AGCGCGGGAC GGTGGATGTG CTGCGTGGCG GCGACATCGA GAACTTCGAG GTCCGCCGGC TGGAGAAATT GCCCGATGTG GTCTCGACCC GCGCGGGCTG GGAGATGTTC GCGCCACCGC TGTGGCTGCA AATGAACCTG CGCAAGCCGC CGTTGGGCAA CAAGAAAGTG CGCCAGGCCA TCATGCATGC GATGGATCGT CACTTCATCG TCAAGAACAT TTTCTTCAAC GTGGGCAAGG TTGCCACCGG CCCCATCACC TCGCCCACGC TGTACTACGA CAAGAACGTT CCGACGTACA AGTACGACAT GGCCCTGGCC AAGAAGATCC TTGCGCAGGC GGGGATAAAG CCGGGCGACT ATTCGATTCG GGTGCTGCCT ATTCCCTATG GCTCGGTGTG GGACCGCATG GGCGAGTACG TCAAGCAGCA GATGGAGCAA CTGGGCTTCA AGGTGACGTT GGATACGACC GACCCGGCGG GCTGGGCGAA GAAGGTTTCG GAATGGGACT TCGACATGAC CATGACCTTT CAGTACGCCT ACGGGGATCC GGCCATCGGC ACCTCGCGCA ACTACATCAG CGCCAACATC ATCAAGGGCA CGCCCTTTGC CAATAACCAC GGCTACAGCA ATCCGGAGAT CGATCGGCTC TTCGAAGCTG CGCCCGTCGT GCAAAGCGCG GACGCGCGCC AGCGCATGTA CAGCGAGATT CAACGCATCC TGGTCGATGA TGTGGCGGCC GGCTATCTCA CTGAATTGCA GTACGTCACG CTGCACAAGA AGAAGGTCCG GAACCTGATC ACCACCGGCA TCGGCCTGAA CGAGACGCTG GACACGGTCT GGATTGCCAA GTGA
|
Protein sequence | MNIARRPFGI SLIAAALSLT SSTFVLAQSQ PTPGGTLNML VQPEPPSLML GLNQLGPTQF AASKIYQSLL TYGPDLKPLP SLAQSWTISP DGLTYAFVLQ KDVKWHDGKP FTSADVVFST DKFLREVHPR TRALMNQRVE SVKADGDDKV IFKLKQPFNA FISAFEVSTM PMIPKHIYEG TNYRTNPANN TPVGTGPFML KEWKRGSYIH LVKNPNYFKP GLPYLDEIYL LVIPDAASRA VAFERGTVDV LRGGDIENFE VRRLEKLPDV VSTRAGWEMF APPLWLQMNL RKPPLGNKKV RQAIMHAMDR HFIVKNIFFN VGKVATGPIT SPTLYYDKNV PTYKYDMALA KKILAQAGIK PGDYSIRVLP IPYGSVWDRM GEYVKQQMEQ LGFKVTLDTT DPAGWAKKVS EWDFDMTMTF QYAYGDPAIG TSRNYISANI IKGTPFANNH GYSNPEIDRL FEAAPVVQSA DARQRMYSEI QRILVDDVAA GYLTELQYVT LHKKKVRNLI TTGIGLNETL DTVWIAK
|
| |