| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4211 |
|---|
| Symbol | |
|---|
| ID | 4694278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4638803 |
|---|
| End bp | 4639942 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639851958 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_998934 |
|---|
| Protein GI | 121611127 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0456551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATGCG TTCTCGCTGG CGCCGCCGCT GCTGCAGAGC CTGTCAAGAT TGGCTTTATC
ACCACCTTGT CGACGCCTGC GGGCTACATT GGCGAGGATC TGCGCGACGG CTTTCTGCTG
GCCGTCAAGC AGGGCGGGGG AAAGCTTGGC GGCATCCCCG TTGAACTGGT CGTTGAAGAT
GACGGACTCA AGCCCGCCAA TGCCAAGCAG GCCGCTGACC GTCTGGTGCA GTCGGGTGTG
CGCCTGTACA CCGGGGTGAA CTTCTCCAAT GTGCTGGCGG CGGTGGTGCC CAGCGTGACC
AAGGCGGGGT ACTTCTACGT CAGCGCCAAC CCCGGTCCTT CCATCTTCGC CGGAGAGAAG
TGCGATCCCA ACTACTTCGT CGCCTCCTAC CAGAACGACG CCTACCACAC GGCCGGCGGC
GTCGCGGCCA ACGAGCTGGG CTTCAAGCGT GTGGTGGCGC TTGCGCCGAA CTATCAGGCG
GGACGCGATG CAATCGCCGG CTTCAAGCGC ACCTTCAAGG GCGAACTGCT CGCAGAGGTC
TACACCAAGC TCGACCAGTC CGATTTCTCG GTGGAGATCG CCCGCATCCG GTCGCTGGCA
CCGGATGCGA TCTATCAATT CCATCCGGGA GGGGCGGGCA TCAACTTCGC CAAGCAGTAC
GGCAACGCCG GCCTGGGCAA GTCCATCCCT ATGGTGATGC CGGGCTTCTC GATGGATGCC
CGCATGCTGT CGGCGACGGG GAGTGCATCC GAGGGGTTCT ACACCACAGG CATCTGGTCG
GTGGCGATGG ACAACCCGGC TTCGCAGAAG TTCGTGCAGG ATTTCAAGAG CGCCTATGGC
CGCATCCCGA CTGACTATGC GATGCAGGCC TACGACACCG CGCAATGGAT CGCTTCCGGC
CTAAAGGCTG CCGGCGGTGA GCTCGCCAAG GCCGATGCAT TTCGTACCGC TCTGCGCAAG
GCCGACTTCC AGTCGCTGCG CGGCAAGTTC GCGCTCAACA CCAACCAGCA CCCGATCCAG
GACCTGTACC TGATGCGCAT CGAGAAGGGC GCAGACGGTG AGCTCGCACC CAAGGTCGTG
CGCAAGATCG TCAGCGATGA CCGGGACAGC TACGCCGCCA ACTGCAAGAT GCCGTCATGA
|
|---|
| Protein sequence | MTCVLAGAAA AAEPVKIGFI TTLSTPAGYI GEDLRDGFLL AVKQGGGKLG GIPVELVVED
DGLKPANAKQ AADRLVQSGV RLYTGVNFSN VLAAVVPSVT KAGYFYVSAN PGPSIFAGEK
CDPNYFVASY QNDAYHTAGG VAANELGFKR VVALAPNYQA GRDAIAGFKR TFKGELLAEV
YTKLDQSDFS VEIARIRSLA PDAIYQFHPG GAGINFAKQY GNAGLGKSIP MVMPGFSMDA
RMLSATGSAS EGFYTTGIWS VAMDNPASQK FVQDFKSAYG RIPTDYAMQA YDTAQWIASG
LKAAGGELAK ADAFRTALRK ADFQSLRGKF ALNTNQHPIQ DLYLMRIEKG ADGELAPKVV
RKIVSDDRDS YAANCKMPS
|
|---|
| |