| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4179 |
|---|
| Symbol | |
|---|
| ID | 4692941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4600160 |
|---|
| End bp | 4601110 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639851926 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_998902 |
|---|
| Protein GI | 121611095 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.326107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAC CCGTTTATGT AGGTATCGAC GTGGCCAAGC GCACCTTCGA GGTGGCCGCC
ACTGGTCAAG CACAGACCTT CAGTCTTGGC AACGATGAGG CCGGGCATGC CCGGCTGTGC
CAACTGCTGG CGCCGCTGTC GCCGCGCCTG GTGCTGCTGG AGGCCACCGG CGGCTACGAG
CAGGACCTGG CGCTTGCCTT GTCCGCGGCA GGCTTGCGTG TGTCGGTGAT CAATCCGCGC
CAGGCGCGCG ACTTTGCCCG TTGCATGGGC AAACTGGCCA AGACCGATCG CATCGATGCG
CAGGCGCTGC GCGGCTTTGC CGCCTTGCTG GACGCCCAGG GTCACGAGCC GCGCATGCTG
GCCGACGAGC AGCAGCGCGA GTTGACCTCC CTGGTGGTGC GCCGCCGCCA ACTCGTGGCC
ATGCTGGTGG CCGAACGCCA GCGACTGGCC CTGGCACATC CCAAGGCCAA GCCCAGCATC
TTGCGGATCA TGGCTACCAT TGCCGAGCAA CTCAACGACC TGGACGGGCA GCTCAAGGAG
CATGTCCTGG CACACCACGC CGATTTGGCG GCCTTGCTGA CCTCGGTCAA GGGCGTGGGT
CCCACCACGG CCAGCACGCT GCTGGCGCAA CTGCCCGAGT TGGGCCAGCT CCATCGCAAG
CAGATCACCT CGCTGGTGGG CTTGGCCCCC ATCAATCGGG ACTCGGGCAC GCTGCGTGGA
CAGCGCCACA TCTTCGGCGC TCGCGCCGAC GTGCGCCGCG TGCTGTTCGT GGCCGCCTTG
GTAGGCACAC GCTTCAATCC CGTGCTCAAA GCCTTCTATG CAAGGCTGCT GGCCGCCGGC
AAGCCCAAAA AGGTCGCTCT GCTCGCCTGC ATGCATGCAC AAGCTGTTGG TCATCTTGAA
CGCTATCGCT CGCACCAAGT CGCCTGGGCG CAACGAACCG GTTTGACTTA G
|
|---|
| Protein sequence | MSEPVYVGID VAKRTFEVAA TGQAQTFSLG NDEAGHARLC QLLAPLSPRL VLLEATGGYE
QDLALALSAA GLRVSVINPR QARDFARCMG KLAKTDRIDA QALRGFAALL DAQGHEPRML
ADEQQRELTS LVVRRRQLVA MLVAERQRLA LAHPKAKPSI LRIMATIAEQ LNDLDGQLKE
HVLAHHADLA ALLTSVKGVG PTTASTLLAQ LPELGQLHRK QITSLVGLAP INRDSGTLRG
QRHIFGARAD VRRVLFVAAL VGTRFNPVLK AFYARLLAAG KPKKVALLAC MHAQAVGHLE
RYRSHQVAWA QRTGLT
|
|---|
| |