Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4160 |
Symbol | |
ID | 4694789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4577297 |
End bp | 4578556 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639851907 |
Product | phage integrase family protein |
Protein accession | YP_998883 |
Protein GI | 121611076 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0690268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAGA CTGAACGCGT CACCGACAAG ACGCTGCGGG CCTGGCTCAA CACCGGCCCC GTGGACCGTG GCATCGGTGG CGGCCTGACC TTCGTGGCCA CCGCCGCCGG AGCACTCAAG GGCCAAGCTT CCTGGATTCT TCGCTACCGC TTCGGCGGCG GCGCCCGAGA GAAGGTGCTC GGCCGCTACC CAGACCTGTC GCTCAAGGAC GCCCGTGAAG CGACGCGCCA GAACCGGGCA CGCATCCAGC AGGGCGTGGA CGTGGCCGCC GAGAAGCGCG CAGAGCGGCT CAAGGCCCAT GAACAGGTCG CCGTGGCCGC CCTCGCGCAA GCCTGGTATG ACCGCCACAT CGCCAAGACC TACAAACACC CCGAGGTCGT GCTTCGCGTC ATCCGCCGCC ACATCGAGCC GGCGATCGGC AAGCTGGGCG TGACGGAGGT CCGGCCGCTG CACATCGACA AGGTGCTCAC CCGCATCCTC GATGCAGGCA CGCCGACCGT GGCCAACGAT GCGCTGCGCC ACCTCTTCCG CATGTTCCAC TTCGCCGTGA AGCGCCGCTG GATCGATGCC AACCCGGTCT CTGGCTTCGA GATCTCCGAC GCAGGCGGCT TCGAAGTCTC AAGACAGCGC TGGCTGAACC GCGAGGAACT TGCCGCATTC GCCAAGGCCA TGCAGGACAC GCCCAACTTC GGTCGCCAGA ACGAGCTGGC CGTGTGGCTG CTGCTCGCCC TGTGCGTGCG CAAGATGGAG TTGCTGTCGG CCCGGTGGAC CGAGTTCGAC CTGGAGCGTG GCGTCTGGTC GCTGCACCCG TCGCGCACGA AGATGAACCA GTCCATCGAC ATCCCGCTCG CGGCGCCGGT CCTGCGGTGG CTGGAGGAGG TCCAAGTGTT CTCGTGCAAC AGCGAGTACC TGTTCCCGCC GCGCCGGCTG ATCCACATGA AGGGAGGTGT GCCGAGGCGG AACCGCTTCG GCCACATCAG CCCGGACACG CTGAACGTCG CGTTGCTCCG CCTGCCGCTG GACGACATCG AGCACTTCAC CGTGCATGAC ATGCGCCGCA CGGCTCGCAC CCACATGGCC GCACTGGGCG TGGACCGCTT CGTCGCGGAG CGGGCGCTGA ACCACAAGGT CCGCGATGTC GAGGGCGTCT ACAACCAGTA CGACTACTTC GACGAGCGCA AGGTGGCGTT GGATCGATGG GCGCAACTGC TGGAGAAAGT CTCCTCCTCT TTCAAAGAGT GCGGCACCAC CGCCAGGTAA
|
Protein sequence | MTETERVTDK TLRAWLNTGP VDRGIGGGLT FVATAAGALK GQASWILRYR FGGGAREKVL GRYPDLSLKD AREATRQNRA RIQQGVDVAA EKRAERLKAH EQVAVAALAQ AWYDRHIAKT YKHPEVVLRV IRRHIEPAIG KLGVTEVRPL HIDKVLTRIL DAGTPTVAND ALRHLFRMFH FAVKRRWIDA NPVSGFEISD AGGFEVSRQR WLNREELAAF AKAMQDTPNF GRQNELAVWL LLALCVRKME LLSARWTEFD LERGVWSLHP SRTKMNQSID IPLAAPVLRW LEEVQVFSCN SEYLFPPRRL IHMKGGVPRR NRFGHISPDT LNVALLRLPL DDIEHFTVHD MRRTARTHMA ALGVDRFVAE RALNHKVRDV EGVYNQYDYF DERKVALDRW AQLLEKVSSS FKECGTTAR
|
| |