| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4155 |
|---|
| Symbol | |
|---|
| ID | 4695114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4572142 |
|---|
| End bp | 4573392 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639851902 |
|---|
| Product | putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_998878 |
|---|
| Protein GI | 121611071 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCG CTGCGTCCAT CACGGCCGCC CCGGTGCGCG ACGTTGCGCA TTACCTGCGG
CCCGGCAGCC TGCAGTTGCC CGTGCTGCCG CCGCTGTCGC TGTACGTGCA TCTGCCCTGG
TGCCTGCGCA AATGCCCTTA TTGCGACTTC AACTCGCATG CCTTGCGCGC CGGCAACGCC
GGGAGCGCCG CCGAACCACT GCCCGAGCAG CGCTACCTGG CGGCGCTGAT GGCCGACCTG
GAGGCGGCGC TGCCGCTGGT CTGGGGCCGC ATGGTGCGCA GCGTCTTCAT CGGCGGGGGC
ACGCCCAGCC TGTTTTCGCC CGCCGCGATC GACCAGTTGA TCGGCGCCAT CCGCGCCCGC
CTGCCGCTCG TGCCCGCCTG CGAGATCACG CTGGAGGCCA ATCCCGGCAG CTTCGAGAAA
GAGCGCTTCC GGGCCTTCCG GGCGGCGGGC GTGACACGCT TGTCGGTGGG AGTGCAAAGT
TTCGCTGACC GGCACCTCGC GGCCCTGGGC CGGGTGCACG ACCGCGCCCA GGCCCTGGCC
GCAGTGCAAG AGGCGGCCCA GGCGTTCGAG ACCTTCAACC TCGACATCAT GTACGCGCTG
CCGGGCCAGA CCCTGCAAGA GTTGGAGCAG GACTTGCGCC AGGCGTTGGC GCTCGAGCCG
CCGCACATCA GCGTCTACCA GTTGACGATC GAGCCCAACA CCCGCTTCGC CAAGTTTCCC
CCGGCCCTGC CCGAGGACGA CCTGGCCTAT GCGATGCTCG ACCGCATCAC GCAACTGACC
GGGCAGGCCG GGCTGGCGCG CTACGAAATC TCGGCCTACG CGCGGCCCGG CCAGCAATGC
GCCCACAACA CCAACTACTG GCAGTTTGGC GACTACCTGG GCATAGGCGC AGGCGCCCAC
AGCAAGCTCA GCTTTGCGCA CCGGGTGGTG CGGCAGGTGC GGCTGCGCGA ACCGGGCCGG
TACATGGAGC AGGCCCTGGC CGGGCGCGCA TTGGCGCAGG ACGAGGAGGT GCGCCGGGCC
GATCTGCCGT TCGAGTTCAT GCTCAACGCG CTGCGCCTGT GCGACGGCTT CGCGCCGCAG
GACTTCATGG CCCGCACCGG CCTGCCGCTG TCGGCCATCG CCGAAGGTCT GGCGAGCGCC
GAGCGCCAAG GTCTGATCGA GCGCAGCATG GAGCGCATAC GCGCCACGCC ACGGGGCCTG
GACTTCCTGA ACGACTTGCA GGTGCTGTTT CTGGCCGATC GGGAGCGCTG A
|
|---|
| Protein sequence | MASAASITAA PVRDVAHYLR PGSLQLPVLP PLSLYVHLPW CLRKCPYCDF NSHALRAGNA
GSAAEPLPEQ RYLAALMADL EAALPLVWGR MVRSVFIGGG TPSLFSPAAI DQLIGAIRAR
LPLVPACEIT LEANPGSFEK ERFRAFRAAG VTRLSVGVQS FADRHLAALG RVHDRAQALA
AVQEAAQAFE TFNLDIMYAL PGQTLQELEQ DLRQALALEP PHISVYQLTI EPNTRFAKFP
PALPEDDLAY AMLDRITQLT GQAGLARYEI SAYARPGQQC AHNTNYWQFG DYLGIGAGAH
SKLSFAHRVV RQVRLREPGR YMEQALAGRA LAQDEEVRRA DLPFEFMLNA LRLCDGFAPQ
DFMARTGLPL SAIAEGLASA ERQGLIERSM ERIRATPRGL DFLNDLQVLF LADRER
|
|---|
| |