| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4121 |
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| Symbol | |
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| ID | 4695052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 4520121 |
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| End bp | 4521686 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639851868 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_998844 |
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| Protein GI | 121611037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.157439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTCA AGCTATCGAT GCTGTTCGCC GTCGTCTTGG CCGCGGCATC GGGCGGCACT
TGCGTGCTGG CCAAAACCGC CAAAGACATA TTGGTGATCG GAAAATCGGC CGATCCGCAA
AACCTGGATC CGGCCGTCAC GATGGACAAC AACGACTGGA CGGTCACATA CCCGGCGTAC
CAGCGTCTGG TGCGCTACAA GGTCCATGAC GGCAAGGCTT CCAGCGAGTT GGAAGGCGAT
TTGGCGCAAA GCTGGAGTAG TTCGCCAGAC GCGATGACCT GGGAATTCAA GCTCAAGCCG
GGCAGCAAAT TCGCCGATGG TTCGCCGGTC GATGCCCATG CGGTGAAGTT CTCCTTCGAG
CGTTTGCTGG CCTTGAAAAA AGGCCCTTCC GAACCCTTCC CCCCGGGCAT CGAGGTCAGC
GCGCCCGACG CGTCGACCGT GCGCTTCAAG CTCAAGACCG GCTTTGCGCC TTTCCTGTCG
ATCCTGGCCA TCGATGGCGC GTCGGTGGTC AACCCGAAAG TGATGCAATA CGAACAAAAC
GGCGACAAGG CCCAGGGCTG GCTGGCGGGG CACACCATGG GCAGCGGCGC CTTCCAACTG
AGCAGTTGGC AAAAGGGCCA AAGCATCGTG ATGGACAAAA GCCCGCATCC GAATGGAGCG
GCGCCGGCCT TCAACAAAGT GATCATCAAG TTCGTGCCCG AGGCCTCGGC GCGCCGCCTG
CAACTGCAAG GCGGCGACAT GGACATTGCC GAAGACCTGC CGCCCGACCA GATCGAAAGC
CTGAAAGCGC AACAGGGCCG CCAGGGCGTC GTGGTGGGCG ACTACCCGAG CTTGCGCGTC
ACCTACCTGT ACCTGAACAA CAAAAAAGCG CCGCTGGACA AGCCCGAGGT GCGCCGCGCC
ATCATCGCCG CCGTCGATGT GCGCGCCATC ATCGACGGCA TTTTCTCGGG CAAGGCCAAG
GCCATGAACG GGCCCATTCC CGAAGGCATG TGGGGGCACG ACGCGCAGGC TGCGCCCGCA
GCCTTTGCGC CGGCCAAGGC CAGGGAACTG CTGGCCAAAG CCGGGCTGCG CAATATCCGG
CTGGGCTTTT TGCTGTCGGA CAAAGACCCT TCGTGGAGCC CGATCGCGCT GGCCACGCAG
TCCAACCTGG CCGATGTCGG CATCCAGGTG CGCCTGGAAA ACATGGCCAA TGCCAGCTTT
CGCGAACGTG TCGGCAAGGG CGACTTCGAT ATCGCCATCG GCAACTGGAG CCCCGACTTT
GCCGACCCCT ACATGTTCAT GAACTACTGG TTCGAGAGCG ACAAGCAGGG GGCCGCCGGC
AACCGCTCCT TCTACTCCAA CCCCCGGGTC GATGCGCTGC TGGCCAGAGC GGCCCATGCG
AGCGCCTTGT CCGAGCGCAG CAGGCTGTAC CAGGAGGCGC AAAAAATCGT GGTCGACGAT
GCGGTCTATG TCTACCTGTT TCAGAAAAAC ACCCAGATCG CCGCGCGCAG CAGCGTCAAG
GGGCTGGTGT TCAACCCGAT GCTCGAGCAG ATCTACAACG TCCAGCAGAT GTCCAAGTCC
GAGTAG
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| Protein sequence | MKLKLSMLFA VVLAAASGGT CVLAKTAKDI LVIGKSADPQ NLDPAVTMDN NDWTVTYPAY
QRLVRYKVHD GKASSELEGD LAQSWSSSPD AMTWEFKLKP GSKFADGSPV DAHAVKFSFE
RLLALKKGPS EPFPPGIEVS APDASTVRFK LKTGFAPFLS ILAIDGASVV NPKVMQYEQN
GDKAQGWLAG HTMGSGAFQL SSWQKGQSIV MDKSPHPNGA APAFNKVIIK FVPEASARRL
QLQGGDMDIA EDLPPDQIES LKAQQGRQGV VVGDYPSLRV TYLYLNNKKA PLDKPEVRRA
IIAAVDVRAI IDGIFSGKAK AMNGPIPEGM WGHDAQAAPA AFAPAKAREL LAKAGLRNIR
LGFLLSDKDP SWSPIALATQ SNLADVGIQV RLENMANASF RERVGKGDFD IAIGNWSPDF
ADPYMFMNYW FESDKQGAAG NRSFYSNPRV DALLARAAHA SALSERSRLY QEAQKIVVDD
AVYVYLFQKN TQIAARSSVK GLVFNPMLEQ IYNVQQMSKS E
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