Gene Veis_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4005 
Symbol 
ID4694015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4395521 
End bp4395925 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content69% 
IMG OID639851753 
Producthypothetical protein 
Protein accessionYP_998729 
Protein GI121610922 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.214613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.145061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA CGGCACCGAC ACCTGCATCC GCCGCTGCGG ACTGGACCAC CGGCCACGAA 
GCCCTGCTCT ACGAAGCCTG CAGCGCCTGC GGCCAGCGCA GCTATTTCCG GCGCGGTTTC
TGCCCGCGCT GCGGCGCCTC GCCGGTCGCG GTGCATGTGT CGCAGCGCAA GGGCACCGTG
TATGCCGTGA CCATCGTGGC GCGCGCGCCA ACGCCCGAAT GGCAAGCCCT GGCACCGTAT
CCGTTGCTGC TCGTGGATCT GGACGCCGGC CCGCGCGTGA TGGCGCACGG CACGGCCGGC
CTGGCGATCG GCGATCGCGT GCAGATCGGC TTTCTGCGTC TGGGCGGGCA GCTGATTCCG
CGCGCCGAGC CGATTTCCCA AGAAGACGAA GAAGCATCCC CATGA
 
Protein sequence
MSGTAPTPAS AAADWTTGHE ALLYEACSAC GQRSYFRRGF CPRCGASPVA VHVSQRKGTV 
YAVTIVARAP TPEWQALAPY PLLLVDLDAG PRVMAHGTAG LAIGDRVQIG FLRLGGQLIP
RAEPISQEDE EASP