Gene Veis_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3985 
Symbol 
ID4694162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4373025 
End bp4374074 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content70% 
IMG OID639851734 
Producthypothetical protein 
Protein accessionYP_998710 
Protein GI121610903 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.19648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0884631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC TGCCCTCTGC GGCCGCGTTT TCTGCGCCTT CCCCACCTTC CCCACGGCTG 
CGCCCGTTGC GCCCGTTGCG CCTGTGCGCT GCCGCCTGGC TGGCGCTGGT GCTGGCGGCC
CTGCCCGCCG GCAGCCCGCT GGCGCAGCAG GGCTACCCGG GCAAGCCGAT CCGCCTGATC
GTTCCGTTCC CGCCGGGCGG CGGCACCGAC ATGATTGCGC GCACCGTGGC GCAAAAAATG
GCCGAGCAGA ACCGCTGGAG CGTGGTGGTG GACAACCGCC CCGGCGCCGG CGGCAACCTG
GGCCTGGGCA GTGCCGCCAA GTCGGCGCCC GATGGCCATA CGCTGGTGCT GGGGCAGACC
AGCAACCTGG CCATCAATCC CGCGCTCTAC CCCCAACTGC CCTATGACCC GCTCAAGGAC
CTGGTGCCGG TGGCGCTGCT GTCGTCCGCG CCCATCGTGA TGGCCACGTC CGTGAAGTCG
GCCTTCAAGA CCTATGCCGA TGTGGTGGCG GCGGCCAGAA AGCAGCCCGA TATGGTCACG
CTCGGCTATT CCGGCAATGG CACGGTGGCG CATCTGGCGG GCGAGTTGGC CCAGAACGCT
GCCGGCATCC GGCTGCGCCA TATTCCGTAC AAAGGCGCGG CCCAGGCCAT GACGGACCTG
GTCGGCGGGC AGATCGATCT GTACATGTCT TCCGTGCCCA CGCTGCTGGG CCAGGTGCGC
AACGGCAAGC TGCGCGCCAT CGTGCTCACC TCGGCCCGGC GCTCGGGCCA GTTGCCGGAC
ACACCCACGC TGGCCGAGTC CGGCTACCCG GGCTTCGATG CGCTGACCTG GTTCGGCATC
CTCGCGCCGG CCGGCACGCC CGCCGCCATC GTGCAGCAGT TGAACCAGGC CATCAACCAG
GCGCTGGCGC AGCCCGATGT GGCCGAAAAA CTGCGCGCCG AAGGCGGCGA GGTGCTCGGC
GGCAGCGCCG AGCGCTTTGC CGAACTGCTG CGCACCGAGG TCACGCGCTG GGGCAAGATC
GTCAAGGACT CGGGGGCCAG CATCGATTGA
 
Protein sequence
MPTLPSAAAF SAPSPPSPRL RPLRPLRLCA AAWLALVLAA LPAGSPLAQQ GYPGKPIRLI 
VPFPPGGGTD MIARTVAQKM AEQNRWSVVV DNRPGAGGNL GLGSAAKSAP DGHTLVLGQT
SNLAINPALY PQLPYDPLKD LVPVALLSSA PIVMATSVKS AFKTYADVVA AARKQPDMVT
LGYSGNGTVA HLAGELAQNA AGIRLRHIPY KGAAQAMTDL VGGQIDLYMS SVPTLLGQVR
NGKLRAIVLT SARRSGQLPD TPTLAESGYP GFDALTWFGI LAPAGTPAAI VQQLNQAINQ
ALAQPDVAEK LRAEGGEVLG GSAERFAELL RTEVTRWGKI VKDSGASID