| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3969 |
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| Symbol | |
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| ID | 4694310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 4354484 |
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| End bp | 4355434 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639851718 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_998694 |
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| Protein GI | 121610887 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.277601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTGA AAAAATTTGC TGCATTCGGG TGTGCGGCCT TGCTTGTTGC GTGGTCGAGC
CCATCATTTG CCGAGCCGGA GCCGGCGAGT TGCCGCAATC TGCGTTTTGC CGACAACGGC
TGGACCGACA TCACGTCGGT GACCGCGCTG GCTTCGGTGG TCTTCGAGGC GCTCGGCTAC
AAGCCAAGCA CGACGATGGC GTCGGTGCCC ATCTCGTTTG CCGGTCTGAA GAACAAGCAG
CTCGATGTAT CGCTGGGCTA CTGGTGGCCG CTGCAGCAGT TGCAGGTTCA GCCGCTCCTC
GACAGCAAGT CGATCAACAT GATCGAACCG CCCAACCTGT CCGGCGCCAA GGCGACGCTT
GCGGTGCCAG GCTACGCTTG GGCAGCCGGC CTGAAGTCGT TCGACGATAT CGCCCGGTAC
CGCAAGGAGC TCGACGGCAA GATCTACGGG ATCGAGTCGG GCAGCAGTGC CAATGCGAAG
ATACAAAAGA TGATCGACCA GAACCTGCAC GGGCTTGGCG GCTTCAAGTT GGTCGAGTCC
AGCGAGGCCG GGATGCTGGT CACGCTCGAG CGTGCGATCC GCAACCAGAA GTGGCTCGTG
TTCTGGGGTT GGGAGCCGCA TCCGATGAAT ATCCAGTTCA GCATCAATTA CCTGTCGGGC
GGCGATGCGA CGTTCGGCCC CAACTACGGC GAGGCGCGCG TCTATACGCT GACCGCGACC
GATTTTCTTG AGCGCTGCCC CAACGCCGGC AAACTGGTCA CGCAGTTGCG CTTCTCGACG
CAGTTGGAGA ACCAGCTGAT GCAGGCGGTG ATGAACAAAA CCAGGCCGGC TGAGGCTGCG
CGTGCGTATC TGAAGCAAAA TCCCCAGGTG CTCGATCCGT GGCTTGCGGA CGTGAAGACC
TTCGATGGCA AGGATGGACT GGCGGCCGCG AAAGCGCAGC TCGGTCTGTG A
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| Protein sequence | MALKKFAAFG CAALLVAWSS PSFAEPEPAS CRNLRFADNG WTDITSVTAL ASVVFEALGY
KPSTTMASVP ISFAGLKNKQ LDVSLGYWWP LQQLQVQPLL DSKSINMIEP PNLSGAKATL
AVPGYAWAAG LKSFDDIARY RKELDGKIYG IESGSSANAK IQKMIDQNLH GLGGFKLVES
SEAGMLVTLE RAIRNQKWLV FWGWEPHPMN IQFSINYLSG GDATFGPNYG EARVYTLTAT
DFLERCPNAG KLVTQLRFST QLENQLMQAV MNKTRPAEAA RAYLKQNPQV LDPWLADVKT
FDGKDGLAAA KAQLGL
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