Gene Veis_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3935 
Symbol 
ID4694362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4323176 
End bp4323775 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content66% 
IMG OID639851684 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_998660 
Protein GI121610853 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.531262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT CTCCCATCGA CGCCAGCAAA AGAACATGGC TGATCGCGTC CGGCTGTGCG 
GGCGCGGTGG GCAGCGCGGC GACCGCCGTT CCTTTCGTCA GCAGTTTCCA GCCTTCCGAG
CGCGCCAAAG CCGCCGGTGC TGCGGTGGAG GTGGACATCT CGGCCCTGAA CCCCGGGGAA
AAGGTCACGG TGGAGTGGCG CGGCAAGCCG GTCTGGATCG TCAGGCGCAC ACCCGCGCAG
TTGGCCGAAC TGCCCAAGCT CGATGACCAG TTGGCCGATC CCCAATCCAG GCGCAAGCCG
GACGAGCTGA CCCCCGCGTA TGCCCGCAAC GAAGCGCGCT CCATCAAGCC CGAGATTTTC
GTCGGTATCG GCATCTGCTC GCACCTGGGG TGCTCGCCTT CGGACAAGTT CCAGCCCGGC
GCCCAGCCCT CGCTGCCGGA CGACTGGCAG GGCGGCTTCC TGTGCCCCTG CCATGGCTCC
ACGTTCGACA TGGCCGGCCG CGTGTTCAAG AACAAGCCCG CACCCGACAA CCTGGAAGTG
CCCCCCCACA TGTACCTTTC CGATACGCGC TTGCTGATCG GTGAAGACAA GCCGGCTTGA
 
Protein sequence
MSDSPIDASK RTWLIASGCA GAVGSAATAV PFVSSFQPSE RAKAAGAAVE VDISALNPGE 
KVTVEWRGKP VWIVRRTPAQ LAELPKLDDQ LADPQSRRKP DELTPAYARN EARSIKPEIF
VGIGICSHLG CSPSDKFQPG AQPSLPDDWQ GGFLCPCHGS TFDMAGRVFK NKPAPDNLEV
PPHMYLSDTR LLIGEDKPA