| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3918 |
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| Symbol | |
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| ID | 4694335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4305211 |
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| End bp | 4306239 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639851665 |
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| Product | dimethylallyltranstransferase |
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| Protein accession | YP_998643 |
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| Protein GI | 121610836 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00996484 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCGTG CACCTTCCGT GACCACCCTC TCGACCGCCC CCCCCATCGC CCCCGCTGCC
CTCACCGCAG CATCCCCGTT GGCACTGGTG GCCGACGACA TGCGCGAGGT CGACAAAGTC
ATCGGCCAGC GCCTGCTATC GAACGTCCCG CTGGTGGATT GGGTGGCGCG ACACATCATC
GCCGCCGGAG GCAAGCGCTT GCGCCCTGCG CTGCTGCTGA TGGTGTGCGG GGCGCTGGGC
TATGGCGGCG CGCACCGCTT GAGCCTGGCG GCCGTGGTCG AACTGATCCA CACTGCCACA
TTGCTGCACG ACGATGTCGT CGACGCCTCC ACCTTGCGCC GTGGTCGCCC CACAGCCAAC
GAAATCTTCG GTGCTCCGGC CTGTGTGCTG GTGGGCGACT TCTTGCACAC CCGCTCGTTC
CAGACCATGG TGGAAACGGG GAACATGCGC GTCATGGAAA TCCTCGCCGA AGCCACGAAC
GTGATCGCCG AGGGCGAGGT GCTGCAACTG ATGAACATGC ATGACGCAAC GCTCGATGAA
GCCGGCTATC TGCGTGTGAT CCGTTCCAAA ACCGCCAAGC TGTTCGAGGC CAGCGCCCGG
CTCGGCGCCG TGCTGGCCCG CAGCAGCCCC GACATCGAGC AAGCCTGCGC CACCTACGGG
CAGGCCCTGG GCACCGCCTT TCAGATCATC GACGATGTCC TGGACTACGA CGGCGACAGC
GCAGAGATGG GCAAGAACCT GGGCGACGAC CTGCGCGAAG GCAAGGCCAC GCTGCCACTG
ATCGCCGCGA TGCAACGAGG CAGCCCCGGG CAGGCGCTGA TCGTGCGCCA AGCCATCAAG
GAAGGCTCGA CGGAGCAACT GGCCGAGATC GTCGGCATCG TGCGCGCGAC CGGCGCGCTC
GAAGTCACCC GCGCCGCCGC CTGCACCGAA GCCCGCCGGG CAATGTCCGC TGCGCAGCAA
CTGCCATCGA ATGCCTATTC GAAGGGTTTG CTAGAATTGG CGGCGCAGTT GCTGGAGCGA
CGCCACTGA
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| Protein sequence | MIRAPSVTTL STAPPIAPAA LTAASPLALV ADDMREVDKV IGQRLLSNVP LVDWVARHII
AAGGKRLRPA LLLMVCGALG YGGAHRLSLA AVVELIHTAT LLHDDVVDAS TLRRGRPTAN
EIFGAPACVL VGDFLHTRSF QTMVETGNMR VMEILAEATN VIAEGEVLQL MNMHDATLDE
AGYLRVIRSK TAKLFEASAR LGAVLARSSP DIEQACATYG QALGTAFQII DDVLDYDGDS
AEMGKNLGDD LREGKATLPL IAAMQRGSPG QALIVRQAIK EGSTEQLAEI VGIVRATGAL
EVTRAAACTE ARRAMSAAQQ LPSNAYSKGL LELAAQLLER RH
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