| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3888 |
|---|
| Symbol | |
|---|
| ID | 4694180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4281015 |
|---|
| End bp | 4281653 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639851635 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_998613 |
|---|
| Protein GI | 121610806 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000455873 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0136 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATACA TGATACTTGG TGTAGTCCTT TTGGCAGTGT CGACCGTACT GAACCCGTTT
CGGATAGGAA AGCTGCAAAT CATTGGCGTC GGTCAAAGGA TGATGTTGCT CAAAAGAGTG
ACGTTCCCGG ACCTTATTTT CCCCCGCTGG CAATCGGTGC TGGCGGTTTC GCTCATCGGC
GTGCTGATTG GTTTGGACCC AAGATCTCAC ACCATGCCGC CCGGTGTGCC CGCGTGGCTG
GGTGTGGTCA TGGGGGGCAT GGGGCTGGTC ACCACTTGGG TGGCGTTCCC GATCATCGTG
GCGGTGCTGC GTTGGTGGCT CAAGCGCGGG GGGCGTTGGG ACGGTCAGGG CGATTTGTTC
AACTTGGTGG CGGCGTCGTG GTTGGTGGCC GATACCTTGG GCGCTGGCTT GGCGGCGCTG
GGTGTGCCGC CGCTGCTGAC CCTGCCTTTG TGGCTGTATT CGGTCTGGGT GGGCGCGCAA
GCCATCGAGG GCGCCATCCC CCAAGCCAGC CTGGGCTATT GCATCGCCGG CATTGCCATC
GGGCTGCTGC CTGCCATCGT GGCTGCGGGA TCGATGTTTG CTCTGGTGGG TGTGCTCATG
GTCGTGACGG GCTTGGTCCC TGGCGGAGCA GGCGCGTGA
|
|---|
| Protein sequence | MTYMILGVVL LAVSTVLNPF RIGKLQIIGV GQRMMLLKRV TFPDLIFPRW QSVLAVSLIG
VLIGLDPRSH TMPPGVPAWL GVVMGGMGLV TTWVAFPIIV AVLRWWLKRG GRWDGQGDLF
NLVAASWLVA DTLGAGLAAL GVPPLLTLPL WLYSVWVGAQ AIEGAIPQAS LGYCIAGIAI
GLLPAIVAAG SMFALVGVLM VVTGLVPGGA GA
|
|---|
| |