Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3886 |
Symbol | |
ID | 4690778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4279024 |
End bp | 4280088 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639851633 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_998611 |
Protein GI | 121610804 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.062552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00498431 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCGTGC ATCCGGGCAG GATGGCGCCC CCGCAGCAGA TGCCGCAGCA GGCACAGCAA CCTGTCGCGG GACATCTCCC GGTGCTCGAA GTGCGGGACT TGCAAACCCG CTTCCCGACC GCTGCCGGCA CGGTCACGCC GGTAGACGGC GTGTCTTTCA CGCTGGCGCG TGGCGAGATC ATGGGCCTGG TCGGCGAATC CGGTTCCGGC AAAAGCGTCA CCGGCTTATC GATCATGGGC CTGATCGACA AGCCCGGTCG CATCACCGGC GGCTCCATCA AACTCAAGGG GCGCGAACTG GTCGGCCTGC CGGAAAAGGC CCTGCGCGCC CTGCGCGGCG CCGACATCGC CATGATCTTC CAAGACCCGA TGATGACGCT CAACCCCGTG CTGCGCGTGG CCACGCAGAT GACCGAGGCG ATCCTGGTGC ATGAGCGCGT GAGCAAGCAG CAAGCGCTCG ACCGCGCCCG CGCCGCCCTG GTCAAGGTCG GCATCGCGGC GCCGGACGAG CGCCTGCAAG CCTATCCGCA CGCGCTTTCC GGCGGCATGC GCCAACGCAT CGCCATCGCC ACGGCGCTGC TGCACAAGCC CGCGCTGATC ATCGCCGATG AACCCACCAC GGCGCTGGAT GTCACCATTC AGGGGCAGAT ACTGGCCGAG GTGCAGCAAT TGGCGCGGCA GGAGGGCATG GCCATGATCT GGATCACGCA CGACCTGTCG GTCGTCGCCG GGCTGGCCGA CAAGATTTGC GTGCTGTATG CCGGCCGGGT CGCCGAGTAC GGCACGGTCG ATCAAGTGCT CGACGCCCCG CTGCACCCCT ATACAGCGGG CCTGATCGCC TCCGTGCCGA GCCATGCGCA AAAAGGCCAG GCGCTGTACC AGATTCCCGG CATGGCACCC ATGTTGCTCG CCCTGCCGCC CGGCTGCGCA TTCCAGGCGC GCTGCCCGCG TGCCGATGCG CAATGCCGCG CAACGCCCCC GCCGCACAGC GCCGACCAGT GCACCGACCA TCGCGCCTGG TGCTGGCATC CGGTGCAGGC ATTGGCAACG CAGGTGAGCG CATGA
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Protein sequence | MSVHPGRMAP PQQMPQQAQQ PVAGHLPVLE VRDLQTRFPT AAGTVTPVDG VSFTLARGEI MGLVGESGSG KSVTGLSIMG LIDKPGRITG GSIKLKGREL VGLPEKALRA LRGADIAMIF QDPMMTLNPV LRVATQMTEA ILVHERVSKQ QALDRARAAL VKVGIAAPDE RLQAYPHALS GGMRQRIAIA TALLHKPALI IADEPTTALD VTIQGQILAE VQQLARQEGM AMIWITHDLS VVAGLADKIC VLYAGRVAEY GTVDQVLDAP LHPYTAGLIA SVPSHAQKGQ ALYQIPGMAP MLLALPPGCA FQARCPRADA QCRATPPPHS ADQCTDHRAW CWHPVQALAT QVSA
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