Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3837 |
Symbol | |
ID | 4693271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4235284 |
End bp | 4236147 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639851586 |
Product | inner-membrane translocator |
Protein accession | YP_998564 |
Protein GI | 121610757 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.622329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.114435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCATCG AACTGATACA ACAAATTCTC AACGGTCTGG TCGTAGGCAG CGTCTACACG CTGATCGCAC TGGGCTTGAC CGTCATTTTC GGCATCCTGG GCATTGCCCA CTTTGCCCAT GGCAGCGTGG CCATGTTTGG CGGCTACCTG ACCCATGCGC TGATGCAGCG CATGGGGGTG AATATCCTGC TGGCCATGGT GCCGGCCATG CTCGTCGGCG CCTTGCTGGG CATGCTGATC GAGCGGCTGG CTTACCGACC CGTGCGCGCG GGGCCGCCAA TCAACGCCTT CATCGTGGCC TTGGGGCTGA CCATGGTGAT CGAAAAACTC AACCTGCTGC TGTTCGGGGT CGATCAGGTG GTTTTGCCCA CCCCGTTTGG GCGCACCCTG GAATGGGGCG AGTGGGCCAT GCCCGAATTG CGGATCTATG TGTTTGTGAT CGCGGTGTTG CTGGTGCTGG CGCTGACGCT GTTCATGCAC CGAACCTGGA TGGGCGCGTC CATCCGCGCC GTGGCGCAGA ACCGTTCGGC AGCAGTGCTG ATGGGGGTGA ATGTCAATCG CGTCTCATCC ATCGTGTTTG CGCTCAGTTC GGCGTTGGGG GTGGCTGCAG GCGTGCTGAT CGGCGCCTTG TTTGCGATTG CGCCGGGGGT GAGCGGTGGA TTGGTGATCA AGGGCTTTGC CGTCTTGATC CTGGGCGGAC TGGGCTCTAT CCCTGGCGCC ATCGTGGGTG GCCTGATTCT GGGGGTGAGC GAGGCCTTGG CGGCGGGCTT TGTGTCCTCG GCCTACAAGG ATGTGATCTC TTTTGTCATC ATGATCGCGG TGCTGCTGCT GCGCCCCGAA GGCCTGATGC GCAGGAAGAC ATGA
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Protein sequence | MFIELIQQIL NGLVVGSVYT LIALGLTVIF GILGIAHFAH GSVAMFGGYL THALMQRMGV NILLAMVPAM LVGALLGMLI ERLAYRPVRA GPPINAFIVA LGLTMVIEKL NLLLFGVDQV VLPTPFGRTL EWGEWAMPEL RIYVFVIAVL LVLALTLFMH RTWMGASIRA VAQNRSAAVL MGVNVNRVSS IVFALSSALG VAAGVLIGAL FAIAPGVSGG LVIKGFAVLI LGGLGSIPGA IVGGLILGVS EALAAGFVSS AYKDVISFVI MIAVLLLRPE GLMRRKT
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