Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3774 |
Symbol | |
ID | 4693160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4164838 |
End bp | 4165614 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639851526 |
Product | short chain dehydrogenase |
Protein accession | YP_998504 |
Protein GI | 121610697 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.644601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.413475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCC GCCTGGAAAA CAAGGTGGCC CTGGTCACCG GCGGCGCGCA GGGCATAGGC GCTGCCACGG CGGCCTTGTT TGTCGAGCAT GGCGCGCGCG TGATCGTCAA TGTGCGCGAG CACACGCCGG CGGCACAGGC TTTCGCACTA TCGCTCGGCG CACCGGACGA GGTGCTGCTG CTGGCCGCCG ACGTCAGCCG ACGCGCCGAG GTCGAGGCCA TGGTGGCGCA GGCGGTCAGC CATTTCGGCC GACTCGATGT GCTGGTCAAC AATGCCGGAA TCAACGTCTT CGATGACCCG CTGCACTTGA GCGATGAAGA CTGGGCCCGG TGCTTTTCGG TGGACCTCGA AGGCGCCTGG CATTGCGCGC GTGCGGTGCT GCCGCATATG CTGGCGCAGC GCGCAGGCAG CATCGTCAAC ATCGCCTCGG TCCATGGGCA CAAGATCATC CCGAACGCCT TCCCCTATCC TGTCGCCAAG CATGGATTGA TCGGCCTGAC CCGTGCGCTG GGCATTCAGT ACGCAGCGCA GGGCATTCGC GTCAATTCGG TCTCGCCGGG GCTGATCCTG ACAGCGCTCG CAGAAAGCGT CTTTCTGGCC AGCCCCGACC CGCAGGCCGA GCGCCGTCGT CAAGAGCAGT TGCTGCCATG CCAGCGGATC GGCGAGGCAT CCGAGGTGGC CTACACCGTG CTCTTTCTGG CCAGCGACGA AGCGCGCTTC ATCAATGCGA CCGACATCTT GATCGATGGC GGCCGCTCCC ATCTCTACCA CGAATGA
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Protein sequence | MKPRLENKVA LVTGGAQGIG AATAALFVEH GARVIVNVRE HTPAAQAFAL SLGAPDEVLL LAADVSRRAE VEAMVAQAVS HFGRLDVLVN NAGINVFDDP LHLSDEDWAR CFSVDLEGAW HCARAVLPHM LAQRAGSIVN IASVHGHKII PNAFPYPVAK HGLIGLTRAL GIQYAAQGIR VNSVSPGLIL TALAESVFLA SPDPQAERRR QEQLLPCQRI GEASEVAYTV LFLASDEARF INATDILIDG GRSHLYHE
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