| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3644 |
|---|
| Symbol | |
|---|
| ID | 4690749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4028684 |
|---|
| End bp | 4029454 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639851399 |
|---|
| Product | histidine utilization repressor |
|---|
| Protein accession | YP_998378 |
|---|
| Protein GI | 121610571 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC ACCCCTCCCA CTCCTCCCGC CGCCGCGCTG CCCCGGCGCC CGCCATGGCG
CTGTACGAGC AGGTCAAGGA CTTCATTGCG CGCAGGATCC AGCAGGGCCT TTGGCGCACG
GGCGACCGCC TGCCGTCCGA GAACGAGTTG GTCAGCCAGT TCGGCATCTC GCGCATGACG
GTCAACCGCG CGCTGCGCGA GTTGGTGCAA CAGGGCCGCA TCGTGCGCGT GGCCGGCGTG
GGCAGCTTTG TCGCCGAAGA CCGGCCCCAG TCGACCTTGC TGCAAATTGC CAACCTGGCC
AGCGAGATCC GCCAGCGCGG CCACGACTAC CGCTGCGACC TGCTGGCCGT GGAGCGCGTC
CCGGCCACGC TGGAGGTGGC TGCGGCGCTG GAGTTGCGCA CCGGAGCGTC GGTATTCCAC
TCGCTGTGCA TACACCGCGA GGACGGCGTG CCGGTGCAAC TGGAAGACCG CCATGTGAAC
CCGCGCCAGG TGCCCGGGTT CGCCGCGCAG GACTTTGCCC GGATGCCGCC CTCCGAATAC
CTGGTGCGCA ACGTGCCGTT CGACCAGATC GAGCATGTGG TCGATGCCGT GATGCCCGGC
GCCAGGCAGG CTGCGCTGCT GGAAATGTCG CCGCAGGAGC CTTGCCTGCT GCTGACGCGG
CGCACCTGGT CGCGCGCGGT GCCGATCACC GTGGTGCGCT GCCTGCATCC GGCCACCCGC
TACCGCCTGG GCAGCCGCTT TCGCGCGGAC GGCAATCCGC TGGCCGGCTG A
|
|---|
| Protein sequence | MSTHPSHSSR RRAAPAPAMA LYEQVKDFIA RRIQQGLWRT GDRLPSENEL VSQFGISRMT
VNRALRELVQ QGRIVRVAGV GSFVAEDRPQ STLLQIANLA SEIRQRGHDY RCDLLAVERV
PATLEVAAAL ELRTGASVFH SLCIHREDGV PVQLEDRHVN PRQVPGFAAQ DFARMPPSEY
LVRNVPFDQI EHVVDAVMPG ARQAALLEMS PQEPCLLLTR RTWSRAVPIT VVRCLHPATR
YRLGSRFRAD GNPLAG
|
|---|
| |