| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3640 |
|---|
| Symbol | |
|---|
| ID | 4691667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4023464 |
|---|
| End bp | 4025767 |
|---|
| Gene Length | 2304 bp |
|---|
| Protein Length | 767 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639851395 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_998374 |
|---|
| Protein GI | 121610567 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0918046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCCGG TCGGCCAGCG CCCGGGTTTG GTGTCGGCGC ATGCACCGGC ACGGCTCGAC
CGAACCGCTT TTCCCCCTCG GGGCGTTGGA GCGCCCGATT TTTTTGACCC TTGCTTCTTC
CACGGAACTT GCATGCCTTC TCACCCCCGA CATCAGCCCC TTGCCACCGG CAAGGCGTGG
CGCCTGGCCG CCGGCAAGGC GTGGCGCCTT GCCGTTGCGC CGCTGGCACT GTGCCTGGCG
CAGGCCGCGC CGGCACAAAC GGCGACCGAA ACAGCGACCG AAGCCTCTGC CACGACACCA
CCCCGGTTGC AGGAGGTGCG CATCAGCGCC GACACCGACA ATGGCATGGG CTTTGCGCCT
GACCAGGCGC AGACGGCGGG CAAGGCCCCC ATGCGGCGCC TGGAAACGCC GCAGTCCGTG
AGCGTGGTCA CGCGCGAGCA GATGGAGTCG CGCCAGATCA CCAACTTGCA GCAGGCGCTG
CAGACCGTGG CGGGCGTAAG CCCGGTCAAC TTCGGCCGCC GGGGGTTTGA CGACATCCAC
ATCCGCGGCT TTCGCTCCAC CGAATCCGTC CTGGTGGACG GCCTGGTGCA AAACACCGGC
ATGTGGGCCA AGCTGCAACC CTATGGCTAC GAGCGCTTCG AAGTGCTCAA GGGCGCCGCC
TCGGTGCTCT ATGGCCAGGT GCAGCCCGGC GGCATCATCA ACGCCGTGAG CAAGCGGCCC
GGCACGCAGG CGATCAGCGA GGTCGGCGTC GTGCTGGGCA GCTTTGGTTT GCGCACGCTG
CAGGCCGACG TGAACCGGCC GCTGGCCGAA TCCGGCAAGA CCGCGCTGCG CATCAACGCG
CAGGTTTCCG ACAGCGGCGA CCCGACGGAC TTCGTCTACC GCAAGGACCG CTGGCTGGCC
GCCTCGCTCG CGCTCGATGC CGGCCCCCGG ACCGACGGGG TGCTGTTTGC CACCTACAAC
CGCAGCCAGT GGCTGCGCCA GCAGGGCCTG TCGCCCTACG GCACGGTGCT GCCCAACCCC
AACGGCAGGC TGCCGCGCAC GCTGTTCACC GGCGACCCCG GCTTTGGCGC CTACGACGTG
CAAAGCAGCA CCTTGGGCTA TACGCTGGAA CACCGGTTCA CGCCCGCCAT GGTGCTGCGC
CAGAACCTGC GCTACGAAAG CCAGCAAGGC ACGGGCCACT TCATCTCGAA CCAGGCCCTG
CAAGCGGACA TGCGGCTGCA AAACCGCGAG GCTTCGCGCC AGTCGATGGA CTACGACATC
CTGGCCACCG ACACCTCGCT GCTGTCGCGC TTTGCGGCCC TGGGCATGCA GCACCAACTG
GTCACGGGGC TGGATCTGCG CAGCGGCCAC AGCCGGTTCA TCCGCCGTGT CTGCCGCATC
GGCGCGCTGG ATTTGTTCGC GCCCCGCTAC GGCATGGCGA CCACCTGCCC CGCGACCCCC
ACCGGCGATG CGCCGGCCAA GCTCACCGTG GCGGGTCTGT ATGCCCAAGA CCAGATCAAG
TTCGGGCCGG GTTGGACGGC GCTGCTGGGC TTGCGCCGCG ACGCTTCGAT GAACCACATC
GACGACCGCG TGAAGGACGT GCAGACGCGG CAAAAGGACA GCGCCACCAC GCTATCGGCC
GGGCTGGTGC ACGAATTCAA GCCCGGCTGG GCCACCTACG CCAGCTATGG CGAGTCGTTC
CTGCCGGTGT CGGGGCTGAC GTTCGAGGGC CAGCCCTTCG TGCCCGAAAC CGGCAAGCAG
TGGGAAGCCG GCCTGAAGTA CCAGGCCATC GGTGGCCGGA TGACCGGCGC GCTGGCCCTG
TTCGACCTGG TGCGCGAGAA CGTCGGCACC GCCGACCCGG CGCACACCGG CCACCGGGTG
CAGACCGGCG CGCAGCGCGC CCGTGGCCTG GAGGTGGAAC TGGGCGCCGA CCTGCAGCGC
GGCGTGAAAC TGAGCGGCGC CTACACCTGG ACGCAGGCCC GGGTCACGCG CGACAACAAC
GCCGCCATCG TCGGCCGGCC GCTGAACCTC ACGCCACGCC ACACAGTCGC GGCCTGGGCC
AACTACCAAC TGGCGCAGTA CCAGCGCGTC ACGCTGGGCC TGGGCGGGCG CTACGTGAGC
GAGCAGATCG GCTCCTACCC GTTCACGCTG CCGGCGTACT TCGTGGCCGA TGCCTCGATC
AGCTACGCCG GCCAGGACTA CCGTGTGACG GCCGGGGTCA AGAACCTGTT CGACCGGGCG
TATTACGACG GCGCAATCAA TGCCAATGTG GTGTCGCCGG CCGCACCGCG CAGCGTCAGC
GTGGGCCTGA CATACTTCTT TTGA
|
|---|
| Protein sequence | MVPVGQRPGL VSAHAPARLD RTAFPPRGVG APDFFDPCFF HGTCMPSHPR HQPLATGKAW
RLAAGKAWRL AVAPLALCLA QAAPAQTATE TATEASATTP PRLQEVRISA DTDNGMGFAP
DQAQTAGKAP MRRLETPQSV SVVTREQMES RQITNLQQAL QTVAGVSPVN FGRRGFDDIH
IRGFRSTESV LVDGLVQNTG MWAKLQPYGY ERFEVLKGAA SVLYGQVQPG GIINAVSKRP
GTQAISEVGV VLGSFGLRTL QADVNRPLAE SGKTALRINA QVSDSGDPTD FVYRKDRWLA
ASLALDAGPR TDGVLFATYN RSQWLRQQGL SPYGTVLPNP NGRLPRTLFT GDPGFGAYDV
QSSTLGYTLE HRFTPAMVLR QNLRYESQQG TGHFISNQAL QADMRLQNRE ASRQSMDYDI
LATDTSLLSR FAALGMQHQL VTGLDLRSGH SRFIRRVCRI GALDLFAPRY GMATTCPATP
TGDAPAKLTV AGLYAQDQIK FGPGWTALLG LRRDASMNHI DDRVKDVQTR QKDSATTLSA
GLVHEFKPGW ATYASYGESF LPVSGLTFEG QPFVPETGKQ WEAGLKYQAI GGRMTGALAL
FDLVRENVGT ADPAHTGHRV QTGAQRARGL EVELGADLQR GVKLSGAYTW TQARVTRDNN
AAIVGRPLNL TPRHTVAAWA NYQLAQYQRV TLGLGGRYVS EQIGSYPFTL PAYFVADASI
SYAGQDYRVT AGVKNLFDRA YYDGAINANV VSPAAPRSVS VGLTYFF
|
|---|
| |