Gene Veis_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3417 
Symbol 
ID4691707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3787935 
End bp3788885 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content64% 
IMG OID639851174 
Productinner-membrane translocator 
Protein accessionYP_998156 
Protein GI121610349 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.254798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA GCACGTACTG GGGGCGCATC GCCCGGCGCT ACGGCGGCAT TTTGCTCGGT 
CTGATCGCGC TGGTGCTGCT GTTTGCGCTG CTGTCGCCGG CCTTTCTGAC GACCGGGAAT
CTGCTCAATA TCGTGCTGCA GGTGTCGATC ATCGCCATCG TCGCGTTCGG TATCACCTAT
GTGTTGCTGC TCGGCGAGAT CGATCTGTCC GTGGGCGCGA TCATCGCGCT GTGCGGCAGC
GTTGCCGGTC TGCTGCTGGC CCGGGAAATG CCGCTCCTGT GGGTCGTCGG TGCCACGCTG
GCCTGCGGGC TGGTGCTGGG CGCCGTCAAC GGAGCCTTGT CGGCGCTGCT CGGCATTCCG
TCGTTCATCG TGACGGTGGC GACGATGGGC ATCTTTCGCG GGCTGGCTTT CATTGCCTCG
GACGGCATGC CGGTGCCGGT CGACGACGAA GCCTTCATCC GGATCGGCAA CGGCCACATG
CTCGGTCTGC CGGTGCCGAT CTGGATCTTG GCAGCGCTGC TGGCGCTGAA CCACTGCGTG
CTGTCCAAGA CCGTCTTTGG CCGCAAGGCG TATCTTGCCG GCGGCAACGC AGAGGCGGCG
GTCTATGCGG GCATTCGCGT CAAGCGTCTG AAAATCGCCA TCTTCACGCT CTCGGGGTTG
ATGGCCGCAG TGGGCGGCAT GGTGCTGACG GCGCGGCTGT ACTCCGCGCA GCCGAACGCA
GCGCTCGGCT GGGAGCTCGA CGCGATTGCG GCAGCCGTTC TGGGCGGCAC CAGTTTGGCC
GGCGGCTACG GAACCATGGT CGGCACGCTG ATCGGTGCGT TGATCATCGG CGTCATCAAC
AACGGCATGA ACCTGATGAG CGTGCCGTAC TTCTACCAAC TCATCGTCAA GGGCGCCGTC
ATCCTCGTGG CGGTCTGCAT CGATGTGCAA AACAAAAAGC GCCGCGGGTA G
 
Protein sequence
MSVSTYWGRI ARRYGGILLG LIALVLLFAL LSPAFLTTGN LLNIVLQVSI IAIVAFGITY 
VLLLGEIDLS VGAIIALCGS VAGLLLAREM PLLWVVGATL ACGLVLGAVN GALSALLGIP
SFIVTVATMG IFRGLAFIAS DGMPVPVDDE AFIRIGNGHM LGLPVPIWIL AALLALNHCV
LSKTVFGRKA YLAGGNAEAA VYAGIRVKRL KIAIFTLSGL MAAVGGMVLT ARLYSAQPNA
ALGWELDAIA AAVLGGTSLA GGYGTMVGTL IGALIIGVIN NGMNLMSVPY FYQLIVKGAV
ILVAVCIDVQ NKKRRG