Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3332 |
Symbol | |
ID | 4691222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3718049 |
End bp | 3718834 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639851095 |
Product | ABC transporter related |
Protein accession | YP_998080 |
Protein GI | 121610273 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.269585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.16412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAACG AACCCATCAT TCGCATCGAG AAGGCCAACA AGTGGTATGG CCAGTTTCAA GTCTTGACCG ACGTCGACCT CGAAGTCAAG GCCGGCGAGC GAATCGTCAT CTGCGGCCCT TCTGGATCGG GCAAGTCCAC GCTCATTCGC TGCATCAACC ACCTGGAGAA GGTGGAGAAG GGCCGCATTG CCGTGGACGG CATCGAGCTC ACGGGGCACG AGCGCAAGAA CGTGGATGCC GTGCGACGTG AGGTGGGCAT GGTGTTCCAA CAGTTCAACC TGTTCCCGCA CCTGACGGTA CTCCAGAACT GCACCTTGTC CCCCATGCAT TCGCGTGGCG TGCCACGCGA AGCGGCAGAG GCGACGGCCA TGAAATACCT CCAGCGCGTG CGAATCCCCG AGCAGGCAAA CAAATACCCA AGCCAACTGT CCGGGGGGCA GCAACAACGC GTGGCGATTG CGCGAGCGCT GTGCATGAAT CCGAAGATCA TGCTGTTCGA CGAACCCACC TCCGCACTCG ACCCGGAGAT GGTCAATGAA GTGCTCGACA CGATGATCGG GTTGGCCGAA GACGGTATGA CCATGCTCTG CGTGACACAC GAGATGGGGT TCGCGAGACG GGTCGCAGAC CGTGTCATCT TCATGGCCGA CGGCCGCGTG CTTGAAATGG CACCACCGGA CCAGTTCTTC GGCAACCCGC AACACCCGAA ACTGAAGGCC TTCCTCGGGC AAATCTTGAG TTCGGGCGAG CGGCAGCCAC TGCACTATTC ATACGGGTCT CAATAG
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Protein sequence | MSNEPIIRIE KANKWYGQFQ VLTDVDLEVK AGERIVICGP SGSGKSTLIR CINHLEKVEK GRIAVDGIEL TGHERKNVDA VRREVGMVFQ QFNLFPHLTV LQNCTLSPMH SRGVPREAAE ATAMKYLQRV RIPEQANKYP SQLSGGQQQR VAIARALCMN PKIMLFDEPT SALDPEMVNE VLDTMIGLAE DGMTMLCVTH EMGFARRVAD RVIFMADGRV LEMAPPDQFF GNPQHPKLKA FLGQILSSGE RQPLHYSYGS Q
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