Gene Veis_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3332 
Symbol 
ID4691222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3718049 
End bp3718834 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID639851095 
ProductABC transporter related 
Protein accessionYP_998080 
Protein GI121610273 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.269585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.16412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACG AACCCATCAT TCGCATCGAG AAGGCCAACA AGTGGTATGG CCAGTTTCAA 
GTCTTGACCG ACGTCGACCT CGAAGTCAAG GCCGGCGAGC GAATCGTCAT CTGCGGCCCT
TCTGGATCGG GCAAGTCCAC GCTCATTCGC TGCATCAACC ACCTGGAGAA GGTGGAGAAG
GGCCGCATTG CCGTGGACGG CATCGAGCTC ACGGGGCACG AGCGCAAGAA CGTGGATGCC
GTGCGACGTG AGGTGGGCAT GGTGTTCCAA CAGTTCAACC TGTTCCCGCA CCTGACGGTA
CTCCAGAACT GCACCTTGTC CCCCATGCAT TCGCGTGGCG TGCCACGCGA AGCGGCAGAG
GCGACGGCCA TGAAATACCT CCAGCGCGTG CGAATCCCCG AGCAGGCAAA CAAATACCCA
AGCCAACTGT CCGGGGGGCA GCAACAACGC GTGGCGATTG CGCGAGCGCT GTGCATGAAT
CCGAAGATCA TGCTGTTCGA CGAACCCACC TCCGCACTCG ACCCGGAGAT GGTCAATGAA
GTGCTCGACA CGATGATCGG GTTGGCCGAA GACGGTATGA CCATGCTCTG CGTGACACAC
GAGATGGGGT TCGCGAGACG GGTCGCAGAC CGTGTCATCT TCATGGCCGA CGGCCGCGTG
CTTGAAATGG CACCACCGGA CCAGTTCTTC GGCAACCCGC AACACCCGAA ACTGAAGGCC
TTCCTCGGGC AAATCTTGAG TTCGGGCGAG CGGCAGCCAC TGCACTATTC ATACGGGTCT
CAATAG
 
Protein sequence
MSNEPIIRIE KANKWYGQFQ VLTDVDLEVK AGERIVICGP SGSGKSTLIR CINHLEKVEK 
GRIAVDGIEL TGHERKNVDA VRREVGMVFQ QFNLFPHLTV LQNCTLSPMH SRGVPREAAE
ATAMKYLQRV RIPEQANKYP SQLSGGQQQR VAIARALCMN PKIMLFDEPT SALDPEMVNE
VLDTMIGLAE DGMTMLCVTH EMGFARRVAD RVIFMADGRV LEMAPPDQFF GNPQHPKLKA
FLGQILSSGE RQPLHYSYGS Q