Gene Veis_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3325 
Symbol 
ID4692947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3710502 
End bp3711455 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content68% 
IMG OID639851088 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_998073 
Protein GI121610266 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.650589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.092891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTG CCTCGCTTCG CTACATCGCC GCGCGCGCGG GCGGCATGCT CGTCGTGCTG 
GCCATCGTGG CGGTGCTGGT CTTTGTGCTC ACGCGCGCCG CGTCGGGTGA TCCGGTGTCG
GTGCTGCTGG GCGACCAGGC CACGGCCGCC GACATCGCGC GCGTGCAGAA GGAATACGGC
CTCGACAAGC CGCTGCCCGT GCAGTTCGGC TACTGGCTGC GCGCAGTGCT GCAGGGCAAC
CTGGGCACCT CGATCTTCCT GCAGCGCCCG GTGACGCAGG CGCTGTGGGA GCGCGCCGAG
CCCACCACGC TGCTGGCGCT CATGGCCGTG GCCATCGCCG CGCTGATCGG CGTGCCCTGC
GGCATCGTCT CGGCGGTGTT TCGCGGGCGC GTGGTCGACC AGCTCTTCAC CGGCATCGCG
ATGCTCGGCG CAAGCATTCC GAGCTTCTGG CTCGGCATCG TGCTGATCCA GGTCTTCGCG
GTGTCGTTCG GATGGTTCCC CGTGTCGGGC TACGGCGCGC CCGACGCGCC ATTCATGGAG
CGGCTGCATG CGCTGGTGCT GCCGGCCACG GTGCTGGGCC TTCTGAACTC GGCGCTCATC
ATCCGCTTCA CGCGCGCCTC GATGCTCGAT GTGCTCGGCG AAGACTATGT GCGCACCGCG
CGCTCCAAGG GCCTCTCCGA GAGCAAGGTG GTGCTCAAGC ATGCGCTGCG CAATGCGCTG
GTGCCCATCG TCACGGTGAT CGGCCTGACG GTCGCGCTGA TGATCGGCGG CGCCGTCATC
ACCGAGACGG TGTTCGGCCT GCCGGGTGTC GGCAATCTCG TGGTGAGTGC GGTGCTGCGG
CGCGACTACC CGGTGATCCA GGGTGCGCTG CTCGTGATCG CCGCGATCTA CGTGCTCATC
AATTTCTCGA TCGACCTGCT GTATGCGGTG GTCGATCCGC GCGTGAAGGT CTGA
 
Protein sequence
MKSASLRYIA ARAGGMLVVL AIVAVLVFVL TRAASGDPVS VLLGDQATAA DIARVQKEYG 
LDKPLPVQFG YWLRAVLQGN LGTSIFLQRP VTQALWERAE PTTLLALMAV AIAALIGVPC
GIVSAVFRGR VVDQLFTGIA MLGASIPSFW LGIVLIQVFA VSFGWFPVSG YGAPDAPFME
RLHALVLPAT VLGLLNSALI IRFTRASMLD VLGEDYVRTA RSKGLSESKV VLKHALRNAL
VPIVTVIGLT VALMIGGAVI TETVFGLPGV GNLVVSAVLR RDYPVIQGAL LVIAAIYVLI
NFSIDLLYAV VDPRVKV