Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3310 |
Symbol | |
ID | 4694713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 3692830 |
End bp | 3693765 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639851073 |
Product | LysR family transcriptional regulator |
Protein accession | YP_998058 |
Protein GI | 121610251 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.637496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0770151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATAT CGATTCGTAC CCTGCAATAC TTCAATGCCG TTGCCGAGAC TGGTTCCATC TCGGCTGCGA TGCAGACGCT CGACATCTCA CAGGCTGCCA TTACCGAGGC GATTCAACGC CTGGAGGCGC ATCTCGGTTC CATGCTGTTC CGGCGTCATG CCCGTGGCAT GGCACTCACA CATGCGGGCC ACGAATTCTT GCGCCATAGC CACCTCATAC TCAATGCAGT TTCCTCTGCT GAAAATGCCC TGGCCGTGCG TCCTGATGCG ATGACCGGAG AATTATCGAT CGGCGCAGTA TCGCCACTCA TGGGTTATTA CTTGCCAGGG TTGCTGGAGC GGTTTCGGCG TAGTTTCCCG CGCGTCACTG TGCGCATCAT CGAAGAGTCC GGATCGACGA TTGAGCATCT GATAGTCAAC GGCGAAATCG ATGTTGCGCT GACGCTGACT TCGCACCTGG AGAATCATCA TGCCTTTCAC ACGTTGCAAT TGGTTCGCTC ACCCTGGCAC CTATGGCTAC CTACCGGGCA TCGCCTGGTC GGCGCGAAAC CGGTAACCCT GCGCGAATTG CATAATGAAG CCGTGATCGT GTTGCGTAAT GACGAACTCG AACGCACTAC GGGAGACCTG TGGCTGCGCG AGAGTGTCAG ACCACGCATC GTTGCCAAGA CACGATCCGT GGAGGCGGTG CGAAGCCTGG TGGCGACGGG CAACGGAATT TGCGTCCTGC CGGAGGTGCT ATTTCGTCAG TGGTCGAGCG AGGGGCTGCG CCTGATCGCC CAGCCGCTGC GCAACGAGCC TGCCACATTG GAACTGGGGC TGATCTGGAG GCGCGGTGCC AAAGTCTCCG CAGCAATCAG TGCCTTTACC ACGACGGCCA GTAACTACTC GGTGCCACAG TTCCACAGCC CGGCCCATCA AGCAAAACGA GGCTGA
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Protein sequence | MSISIRTLQY FNAVAETGSI SAAMQTLDIS QAAITEAIQR LEAHLGSMLF RRHARGMALT HAGHEFLRHS HLILNAVSSA ENALAVRPDA MTGELSIGAV SPLMGYYLPG LLERFRRSFP RVTVRIIEES GSTIEHLIVN GEIDVALTLT SHLENHHAFH TLQLVRSPWH LWLPTGHRLV GAKPVTLREL HNEAVIVLRN DELERTTGDL WLRESVRPRI VAKTRSVEAV RSLVATGNGI CVLPEVLFRQ WSSEGLRLIA QPLRNEPATL ELGLIWRRGA KVSAAISAFT TTASNYSVPQ FHSPAHQAKR G
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