| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3284 |
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| Symbol | |
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| ID | 4690931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3663588 |
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| End bp | 3664670 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639851047 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_998032 |
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| Protein GI | 121610225 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.970201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGTC GTTCCATCAT CAAACATGCC GGCATCGCCG GCGTGCTGGC CGCAGGCGTA
GCGCCTGCCG TCCACGCGCA GGCCGCCATC CGCTGGCGTC TGGCTTCGAG CTTTCCCAAG
TCGCTGGACA CCATTTACGG CTATGCAGAA GTGTTCTCCA AGGCCGTCAA AGCCATGACG
GGCGGCAAGT TTGAAATCTC CGTGCATGCC GGCGGCGAGT TGATGCCGCC CTTTGGCGTG
GTCGATGGCG TGCAGCAAGG CACCGTGGAA CTGGCGCATA CCGTGCCGTA CTACTTCTAT
GGCAAGAACC CGGCGTTTGC ACTGGGATCG GCCGTGCCCT TCGGCTTCAA CGCCCGCCAG
ATGAACGCCT GGATGATGCA CGGCAACGGG CGCAAGCTGA TGAACGAGTT CTACGGCGCC
TACAACATCA TCAGCTTTCC TGGCGGCAAC ACCGGCGCAC AGATGGGCGG CTGGTACCGC
AAGGAAATCA AGTCCCCCGC CGACTTCAAG GGCATGAAGA TGCGCCTCGG GGGCGGCCTG
ATCGGCGAAG TGATGCAAAA GCTCGGCGCC GTGCCGCAAA GCATCCCCGG CGGTGAAATC
TACCAGGCAC TGGAAAAAGG CACGCTCGAC GCCGCTGAAT GGGTCGGCCC CTACGACGAC
CAGAAACTGG GCTTTCACAA GGTGGCCCCG TACTACTACT ACCCCGGCTG GTGGGAGGGC
GGTCCGGAGA TATCGCTGTA CATCAACCAG AAAGCCTTCG ACAGCCTGTC GGCGGACAAC
AAGGCCATCG TCGAAGCCGC CGCCGGCATG GCCCATGGCG ACATGCTGGC CAAGTACGAC
GCGCTGAACC CCACGGCCCT CAAACAACTG CTGGCCGCCC AAGCCAAGGT GCTGCGGTTC
TCGCCGGCCG TGCTCGACGC CTCGTTCAAA GCCTCGATGG AAGTGTTCGC AGAAAACGAC
GCCAAAAGCC CTGAGTGGAA GAAGATCTAC GCCGACATGC GCACCTTCCA GCGCGACCAG
ATCCTGTGGT TCCGCGTTGC CGAAGGGCAT TACGACAACT TCATGGCGGT GCAGAAGATC
TAG
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| Protein sequence | MQRRSIIKHA GIAGVLAAGV APAVHAQAAI RWRLASSFPK SLDTIYGYAE VFSKAVKAMT
GGKFEISVHA GGELMPPFGV VDGVQQGTVE LAHTVPYYFY GKNPAFALGS AVPFGFNARQ
MNAWMMHGNG RKLMNEFYGA YNIISFPGGN TGAQMGGWYR KEIKSPADFK GMKMRLGGGL
IGEVMQKLGA VPQSIPGGEI YQALEKGTLD AAEWVGPYDD QKLGFHKVAP YYYYPGWWEG
GPEISLYINQ KAFDSLSADN KAIVEAAAGM AHGDMLAKYD ALNPTALKQL LAAQAKVLRF
SPAVLDASFK ASMEVFAEND AKSPEWKKIY ADMRTFQRDQ ILWFRVAEGH YDNFMAVQKI
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