Gene Veis_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3231 
Symbol 
ID4693969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3607208 
End bp3607741 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content59% 
IMG OID639850994 
Productpolyhydroxyalkonate synthesis repressor, PhaR 
Protein accessionYP_997979 
Protein GI121610172 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.431872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.149923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGGAC AAAAAAGCGC CGAAACCAAG TCGGCCCCGC GCGTGATCAA GAAATACCCC 
AACCGCCGTT TGTACGACAC GGATACCTCC AGCTACATCA CCTTGGCCGA AGTGCGCCAA
CTCGTCATGG CCCACCAGAA ACTGGTGGTG CGCGACGCCA AGACGGGCGA AGACCTGACG
CGCAGCATCC TGCTGCAAAT CATCCTGGAA GAGGAGGCCG GCGGCGTGCC CATGTTCACC
GAGGCGGTGC TGGCCAACAT CATCCGTTTC TACGGCCATG CGATGCAGGG CTTCATGGGC
GCTTATCTGG AAAAGAACGT GCAAGCCTTT ACCGACATAC AGGTCAAGCT GGCCGAGCAG
TCGCAAAGCG TGACGCCCGA GATGTGGACC CGGTTCATGA GCCTGCAGTC GCCGATGCTC
AAGGGCATGA TGGGCAACTA TGTGGAGCAG TCGCAGTCGA TGCTCGCGCA AATGCAAGAG
CAGATGCACA AGCAGACCGA GCAGATGCTG GGAGCGTTTG GCCTCAAGCG CTGA
 
Protein sequence
MSGQKSAETK SAPRVIKKYP NRRLYDTDTS SYITLAEVRQ LVMAHQKLVV RDAKTGEDLT 
RSILLQIILE EEAGGVPMFT EAVLANIIRF YGHAMQGFMG AYLEKNVQAF TDIQVKLAEQ
SQSVTPEMWT RFMSLQSPML KGMMGNYVEQ SQSMLAQMQE QMHKQTEQML GAFGLKR