| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3177 |
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| Symbol | |
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| ID | 4692710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3539202 |
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| End bp | 3541964 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639850939 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_997925 |
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| Protein GI | 121610118 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.272894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA CCCTGGTAAT TGCAGAAAAG CCTTCGGTGG CGCAGGACAT CGTGCGCGCA
CTGACCCCCG TGGCGGGCAA GTTCGACAAG CATGAGGACC ACTTCGAGAA CGAGCGCTAT
GTCGTCACCA GCGCTGTCGG CCACCTGGTG GAAATTCAGG CGCCCGAGCA GTTTGAGGTC
AAGCGCGGCA AGTGGAGTTT TGCGCACCTG CCGGTGATTC CGCCGTACTT TGACCTCAAG
CCCGTGGACA AGACCAAGGG CCGCCTCAAT GCAGTGGTCA AGCAGGCCAG GCGCCGGGAC
GTGGGCGCGC TGATCAACGC CTGCGACGCG GGCCGCGAGG GGGAGTTGAT TTTTCGCCTG
ATCGAGCAGT ACGCCGGCGG CGACAAGCCC CTGGGCAAGC CGGTCGAGCG CCTGTGGCTG
CAGTCGATGA CGCCGCAGGC GATTCGCGAC GGCTTTGCCG CGTTGCGCCC CGAGCAGCAG
ATGCAGGGCC TGGCCAGCGC GGCGCGCAGC CGCTCCGAGG CCGACTGGCT GGTGGGCATC
AACGGCACCC GCGCGATGAC GGCGTTCAAC TCGCGCGATG GCGGTTTCTT CTTGACCACC
GTGGGCCGGG TGCAAACGCC CACGCTGTCG CTGGTGGTCG AGCGCGAGGA AAAAATCCGC
CAATTCGTCA GCCGCGACTA CTGGGAAGTG CACGCCCTGT TTGGCGCCGC AGCCGGCCCA
TACCCCGGCA AATGGTTCAA CCCCCAATGG AAGAAAAGCG ATGATGCCGA GGCCCGGGCC
GAGCGCCTGT GGTCTGTCGC CGAGGCCCAG GCGATTGCCC AGGCCGTGCG CGACCAGCCG
GCCAGCGTCA GCGAAGAGAG CAAGCCGAGC ACGCAGGCCG CGCCGCCGCT GTTTGACCTG
ACCAGTTTGC AGCGCGAGGC CAACGGCAAG TTCGGCTTCT CGGCCAAGAC CACCTTGGCG
CTGGCGCAAA GCCTGTACGA GCGCCACAAG GCCCTGACCT ATCCGCGCAC CGATTCGCGC
GCGCTGCCCG AAGACTATCT GCCGGTGGCG CGCCAGACTT TCGAGATGCT CGCCGGCAGC
GCCATGCGCC ACCTGGCGCC GCACGCGCTC ACGGCGCTGA ACAACGGCTA TGTGCGCATG
TCCAGGCGCA TTTTCGACAG CAGCAAGGTC AGCGATCACT TTGCCATCAT CCCCACGCTG
CAAGCGCCCG GCGGCCTCAA CGACGCCGAG CAAAGGCTGT ACGACCTGGT GGTGCGCCGC
TTCATCGCGG TTTTCTTCCC GAACGCGGAA TACACCGTGA CCACGCGCAT CAGCACGGTG
AGCGTGGCGC CGAACGGGGG GGCCGCAGCC GTGCACCGCT TCAAGACCGA AGGCAAGGTG
CTGGTCAAGA CCGGCTGGCT GGCCGTCTAC GGCAAGGAAG CGGCCGACGA GGTGGAGGGC
GGCAAGGAGG GCGACAAGGG CCAAAACCTG GTGCCGGTGC AGCCCGGCGA ACGGGTGCTC
ACCTTGCAGG CCGACCCCCG GGGCTTCAAG ACCAAGCCGC CCGCCCGCTA CTCCGAAGCC
ACGCTGCTGG GCGCGATGGA GAGCGCCGGC AAGCAGCTCG ACGACGACGA ATTGCGCGAG
GCCATGCAGG CAAAGGGCCT GGGCACGCCC GCCACGCGCG CGGCCATCAT CGAAGGACTG
CTGACGGAAA AGTACATGCT GCGCGAAGGC CGCGAGATCA TCCCCACGGC CAAAGCCTTT
CAACTCATGC TGCTGCTGCG CGGGCTGCAG GTCGAGGAAC TGTGCCGCGC CGACCTGACT
GGCGAGTGGG AGTTCAAGCT CGCGCAAATG GAAAAGGGCC AGCTCAGCCG CGCGGCCTTC
ATGGCCGACA TCGCGGCGAT GACCGAGCGC ATGGTGACAA AAGCCCGGGA ATACGACCGC
GACACCATCC CCGGCGACTA CGCCACGCTG CAAGCGCCTT GCCCGAACTG CGCCGGCGTG
GTCAAGGAAA ACTACCGCCG CTATGCCTGC GCCGGCAAGG ACGGCGCATC GCCTTGCGGC
TTCAGCTTTG GCAAGTCGCC CGCCGGCCGC ACCTTTGAAA CTGCCGAGGC CGAGACCCTG
CTGCGCGAGC GCAAGATCGG CCCGCTGGAG GGCTTTCGCT CCAAGGCCGG CTGGCCCTTC
AGTTCCGAGA TCGTCATCCG CTACGACGAG CAGACGCACA ACTACAAGCT CGAATTCGAC
TTTGGCGATG ACAGGAAGAA CGCCGAGGAA TCGGGCGCAC TGGTGGAGTT CAAGGACGCC
GCGCTAGGCC CTTGCCCGCT GTGCGGCGCC GGGGTGCACG AGCATGGCAA CAACTACCTG
TGCAGCAAGT CCGTGCCCAC GGCCGCGCAG CCCGCGCCCA GTTGCAGCTT CAAGAGCGGC
AGGGTCATCC TGCAACAACC GGTGGAGCGC GAGCAGATGC AAAAGCTGCT GGCCACCGGC
AAGACCGACC TGCTCGACAA GTTCGTCAGC ATGCGCACGC GCCGCGCGTT CAAGGCCCAT
CTGGTCTGGG ACCCGGCCGC AGGCAAGGTC AACTTTGAAT TTGCGCCGAG CAAGTTCCCG
CCACGCCAGC CCGTCGCCGC TGCGGCGAAA ACGTCCGCTC ATGTGGGTCA TGCCGGTCAT
GCGGGCAGGG CCGGCAGTGC GCTCAAGGCA GACAGGGCCG TGGCCGCCAA AAAAGCCCCT
GTCAAGCGCG TTGCGGCCAA AGTCAAGGCC GCCGCCGCAA AGCCCCCGCG CAAGGCCGCG
TAG
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| Protein sequence | MTKTLVIAEK PSVAQDIVRA LTPVAGKFDK HEDHFENERY VVTSAVGHLV EIQAPEQFEV
KRGKWSFAHL PVIPPYFDLK PVDKTKGRLN AVVKQARRRD VGALINACDA GREGELIFRL
IEQYAGGDKP LGKPVERLWL QSMTPQAIRD GFAALRPEQQ MQGLASAARS RSEADWLVGI
NGTRAMTAFN SRDGGFFLTT VGRVQTPTLS LVVEREEKIR QFVSRDYWEV HALFGAAAGP
YPGKWFNPQW KKSDDAEARA ERLWSVAEAQ AIAQAVRDQP ASVSEESKPS TQAAPPLFDL
TSLQREANGK FGFSAKTTLA LAQSLYERHK ALTYPRTDSR ALPEDYLPVA RQTFEMLAGS
AMRHLAPHAL TALNNGYVRM SRRIFDSSKV SDHFAIIPTL QAPGGLNDAE QRLYDLVVRR
FIAVFFPNAE YTVTTRISTV SVAPNGGAAA VHRFKTEGKV LVKTGWLAVY GKEAADEVEG
GKEGDKGQNL VPVQPGERVL TLQADPRGFK TKPPARYSEA TLLGAMESAG KQLDDDELRE
AMQAKGLGTP ATRAAIIEGL LTEKYMLREG REIIPTAKAF QLMLLLRGLQ VEELCRADLT
GEWEFKLAQM EKGQLSRAAF MADIAAMTER MVTKAREYDR DTIPGDYATL QAPCPNCAGV
VKENYRRYAC AGKDGASPCG FSFGKSPAGR TFETAEAETL LRERKIGPLE GFRSKAGWPF
SSEIVIRYDE QTHNYKLEFD FGDDRKNAEE SGALVEFKDA ALGPCPLCGA GVHEHGNNYL
CSKSVPTAAQ PAPSCSFKSG RVILQQPVER EQMQKLLATG KTDLLDKFVS MRTRRAFKAH
LVWDPAAGKV NFEFAPSKFP PRQPVAAAAK TSAHVGHAGH AGRAGSALKA DRAVAAKKAP
VKRVAAKVKA AAAKPPRKAA
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