Gene Veis_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3125 
Symbol 
ID4693275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3474454 
End bp3474792 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content67% 
IMG OID639850883 
Producthistone family protein DNA-binding protein 
Protein accessionYP_997874 
Protein GI121610067 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0598577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00823154 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCCAAG ATTCCATGAC CCGCTCGGAC CTCGTCGAAG AACTGGCTGC GCGCTTGACG 
CATCTGACGC GCCATGATGC CGAATCCGCC GTCAAGGCCA TTCTCGACGC CGTGGGCCAG
GCCCTGGTGC GGGGGCACCG CATCGAGATC CGGGGCTTTG GCAGCTTCTC GGTCAGTCAC
CACCCGCCCC GCATGGGCCG CAACCCCCGC AGCGGCGAAG CGGTCGCGAT TCCGCAAAAG
CGTGTGCCGC ACTTCAAACC CGGCAAAGCC TTGCGCGAAG CGGTGGACAA GCGCACCAGC
GAAATGCAGG CCGAGGCCCG GGGCGAGACC GAGGCTTGA
 
Protein sequence
MPQDSMTRSD LVEELAARLT HLTRHDAESA VKAILDAVGQ ALVRGHRIEI RGFGSFSVSH 
HPPRMGRNPR SGEAVAIPQK RVPHFKPGKA LREAVDKRTS EMQAEARGET EA