Gene Veis_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3090 
Symbol 
ID4693384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3441560 
End bp3442099 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content61% 
IMG OID639850849 
Producttranslation initiation factor IF-3 
Protein accessionYP_997841 
Protein GI121610034 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.639467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0869717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCGG AGGTACGCCT GTCCGGGCCT GACAACGAAC CGCTGGGCGT TGTGAGCCTG 
ATCGAAGCCT TGCGCATGGC CGGCGAGTTG GATGTGGATC TGGTGGAAAT CGCCGCCACG
GCGAATCCTC CGGTGTGTCG CCTGATGGAC TATGGCAAGT TCAAGTACCA GGAACAAAAA
CGGGCCGCCG AAGCCAAGGC CAAGCAGACG GTCATCGAGA TCAAGGAAGT CAAGTTTCGT
CCGGGCACGG ACGATGGCGA CTACCACATC AAGATGCGCA ACATCCGCCG TTTTCTGGCC
GACGGCGACA AGTGCAAGAT CACGCTGCGC TTTCGCGGTC GTGAGATCAC GCACCAGGAG
CTCGGTCTGG CATTGCTCAA TCGCATTCGC GACGAGTTGG CCGATGTCAT CATCGTCGAG
CAGTTTCCCA AACTCGAAGG GCGCCAGATG ATCATGATGA TCGCCCCGGG CAAGAAAAAG
CCCGTGGCCA AACCGGTGCC GGACCAAGCC CCGGTCGCCG GCACTGCGGC GGTGACTTGA
 
Protein sequence
MAPEVRLSGP DNEPLGVVSL IEALRMAGEL DVDLVEIAAT ANPPVCRLMD YGKFKYQEQK 
RAAEAKAKQT VIEIKEVKFR PGTDDGDYHI KMRNIRRFLA DGDKCKITLR FRGREITHQE
LGLALLNRIR DELADVIIVE QFPKLEGRQM IMMIAPGKKK PVAKPVPDQA PVAGTAAVT