Gene Veis_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3055 
Symbol 
ID4692806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3409211 
End bp3409768 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID639850814 
Productsugar transferase 
Protein accessionYP_997806 
Protein GI121609999 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0289744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCC TGCTGGATAT CGCGCTGTCT GTGGCGGCGC TGCTCCTGCT CAGCCCGGTC 
TGGCTCGCCG CCGCGCTGGC CAGCGCGCTG GGCGACGGTT TTCCGGTGCT GTTCCGGCAG
GTGCGGGTGG GGCTGCATGG GCGCGAGTTC CGCATGTACA AGTTCCGCAG CATGGTGCGC
CAGGCGGACC GCCTCGGCCC CCATTTCACG ACGGGCGGTG ACGACCCGCG CATCACGCCG
GTGGGGCGCT GGCTGCGGCG CACCAGCATC GACGAATTGC CGCAACTGCT GAATGTGCTC
AAGGGCGACA TGAGCCTGGT CGGCCCCCGC CCCGACCTGC CGGTGCAGCG TGATCTCTAC
ACCGAGGCGC AATGGCTGGC ACGTTGCAGC GTTCGGCCCG GCATCACCGG TTTGGCGCAG
GCGCTGTACC GTTCAGAGGC CACGCATGAG CAGCGACTGG CGGCAGATTT GCGCTACGCA
CGCGAAATGA GCCTGTGGCT GGATCTGCAA ATCATGCTGT GGAGCCTGCG GCGGTTGGGC
GGCAAGGCGG CGAATTAG
 
Protein sequence
MKRLLDIALS VAALLLLSPV WLAAALASAL GDGFPVLFRQ VRVGLHGREF RMYKFRSMVR 
QADRLGPHFT TGGDDPRITP VGRWLRRTSI DELPQLLNVL KGDMSLVGPR PDLPVQRDLY
TEAQWLARCS VRPGITGLAQ ALYRSEATHE QRLAADLRYA REMSLWLDLQ IMLWSLRRLG
GKAAN