Gene Veis_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3006 
Symbol 
ID4690742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3354949 
End bp3356511 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content62% 
IMG OID639850764 
ProductN-6 DNA methylase 
Protein accessionYP_997757 
Protein GI121609950 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.809429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA ACGACACGAA CAAAAAAGGC AGCAACCTCG GCTTCGAGGC CGAGATGTTC 
AAAGCCGCCG ACAAACTGCG CGGCAACATG GAGCCATCCG ACTACAAGCA TGTCGCGCTT
GGTCTCATCT TTCTGAAATA CATCTCGGAC ACCTTTGAGG CCAGGCACAA GTCCCTGCTG
GCCGACAACC CTCAAGATGT CGAAGACCGG GACGCCTACC TCGCCGACAA CGTATTCTGG
GTTCCGAAAG ACGCGCGCTG GTCGCACCTG CAAGCCCATG CCAAGCAGCC CACCATCGGC
ACGCTGATCG ACGACGCGAT GCGCGCCATC GAAAAAGACA ACGCAACGCT CCAGAGCGTG
CTGCCCAAGG ACTACGCCCG GCCAGCGCTC AACAAGGTGA TGCTGGGCGA GTTGATCGAC
CTCATTTCCG GGATCACCCT CAACCAGGAA GGCCACGCCT CGCGCGACAT TCTGGGGCGT
GTCTACGAAT ACTTCCTCGG CCAGTTCGCC GGCGCAGAAG GCAAGCGCGG CGGCGAGTTC
TACACGCCCG GCTCCGTGGT GCGCACCCTC GTCGAGATGC TGGAACCTTA CCAAGGCCGC
ATCTATGACC CCTGCTGCGG CTCGGGCGGA ATGTTCGTGC AGTCCGAAAA ATTCGTGCAA
GAGCACGGCG GCCGCATCGG CGACATCGCC ATCTACGGCC AGGAATCGAA CCACGTCACC
TGGCGCCTGG CCAAGATGAA CCTTGCGGTG CGCGGCATCG ACTCCGACAT CCGCTGGAAC
AACGAAGGCA GCTTTCACAA GGACGAGTTG CGCGACCTCA AGGCCGACTA CATCCTGGCC
AACCCGCCAT TCAATATTTC CGACTGGGGC GGCGACCGTC TGCGGGAGGA TGTGCGCTGG
AAGTTCGGCG TGCCCCCGGT GGGCAACGCC AACTACGCGT GGCTGCAACA CATCGTGCAC
CACCTGGCGC CGAATGGCAC CGCAGGCGTG GTGCTGGCCA ACGGCTCGAT GTCATCCAGC
CAGTCGGGCG AAGGCGACAT CCGCCGCGAG ATGGTCGAGC AAGACATCGT CGATTGCATG
GTGGCGCTGC CGGGCCAGCT TTTTTACTCG ACGCAAATCC CGGCTTGCCT GTGGTTTCTG
GCGCGCGACA AATCGAACGG GCGTGCGGGC AAAGCCTATC TGCGCGACCG GCGCAAAGAA
GTGCTGTTCA TCGATGCACG CAAGCTCGGC GTGCTGGTGG ATCGGACACG GCGTGAACTC
ACCGATGCCG ATGTTCGACG GATAGCAGGC ACCTACCACG CATGGCGCGG TGAGCCGGGC
GTGGGTGCGT ATGCGGATGT GCCGGGCTTT TGCAAAGCGG CAACACTGGA CGACATCCGC
AAACACGGGC ATGTGCTGAC GCCGGGGCGG TATGTGGGCG CCGAAGAAGT CGCCGACGAC
GGCACCCCTT TCGAGGAAAA AATGCAGATA CTCACTGCCG AGTTGAACGC GCAGTTCGCC
GAGTCTGCAA GGCTGGAGCA GGCAATACGA CTGAATCTGC AAGCCCTGGG GTACAAGCCA
TGA
 
Protein sequence
MAQNDTNKKG SNLGFEAEMF KAADKLRGNM EPSDYKHVAL GLIFLKYISD TFEARHKSLL 
ADNPQDVEDR DAYLADNVFW VPKDARWSHL QAHAKQPTIG TLIDDAMRAI EKDNATLQSV
LPKDYARPAL NKVMLGELID LISGITLNQE GHASRDILGR VYEYFLGQFA GAEGKRGGEF
YTPGSVVRTL VEMLEPYQGR IYDPCCGSGG MFVQSEKFVQ EHGGRIGDIA IYGQESNHVT
WRLAKMNLAV RGIDSDIRWN NEGSFHKDEL RDLKADYILA NPPFNISDWG GDRLREDVRW
KFGVPPVGNA NYAWLQHIVH HLAPNGTAGV VLANGSMSSS QSGEGDIRRE MVEQDIVDCM
VALPGQLFYS TQIPACLWFL ARDKSNGRAG KAYLRDRRKE VLFIDARKLG VLVDRTRREL
TDADVRRIAG TYHAWRGEPG VGAYADVPGF CKAATLDDIR KHGHVLTPGR YVGAEEVADD
GTPFEEKMQI LTAELNAQFA ESARLEQAIR LNLQALGYKP