Gene Veis_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2998 
Symbol 
ID4692154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3345047 
End bp3345775 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID639850756 
ProductABC transporter related 
Protein accessionYP_997749 
Protein GI121609942 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.240858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.557756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC CATCCCGGCA GCTACTGCTG CAGGTCAAGG GCCTGCAAGT GGCCTACGGC 
GGCATACAGG CCGTCAAAGG CGTGGACTTT GAAGTGCGCG CAGGCGAACT GGTCTCGCTG
ATCGGCTCCA ACGGCGCCGG CAAGACCAGC ACCATGAAAG CCATCACCGG CACCCTGGCG
CCGAGCGCTG GCCACATCGA ATACCTGGGC GCAGACATCC AGGGCCAGGG GGCCTGGGAC
CTGGTCAAAA AAGGCTTGGT GATGGTGCCC GAAGGGCGCG GGGTTTTTGC CCGCATGAGC
ATCACCGAAA ACCTGCAAAT GGGCGCCTAT ACCCGCAAGG ACCAGGCCGG CATCCTGGCC
GACATCGAAA AGATGTTCGG CATCTTCCCG CGCCTGCGCG AGCGCAAGGA CCAACTGGCC
GGCACCCTGT CGGGCGGCGA GCAGCAAATG CTGGCCATGG CGCGCGCGCT GATGAGCCAG
CCCAAGCTGC TGCTGCTCGA CGAGCCATCG ATGGGCCTGT CGCCGCTGAT GGTCGACAAA
ATCTTCGAGG TGGTGCGCGA TGTGTATGCG CTGGGCGTGA CCATCTTGCT GGTCGAACAA
AACGCCAGCC GCGCCCTGGC CATTGCCGAC CGTGGCTATG TGATGGAGTC CGGCCTGATC
AACATGACCG GCCCCGGCCA GCAACTGCTC AGCGACCCGG GGGTGCGCGC AGCCTATCTG
GGCGAGTGA
 
Protein sequence
MAEPSRQLLL QVKGLQVAYG GIQAVKGVDF EVRAGELVSL IGSNGAGKTS TMKAITGTLA 
PSAGHIEYLG ADIQGQGAWD LVKKGLVMVP EGRGVFARMS ITENLQMGAY TRKDQAGILA
DIEKMFGIFP RLRERKDQLA GTLSGGEQQM LAMARALMSQ PKLLLLDEPS MGLSPLMVDK
IFEVVRDVYA LGVTILLVEQ NASRALAIAD RGYVMESGLI NMTGPGQQLL SDPGVRAAYL
GE