Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_2998 |
Symbol | |
ID | 4692154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3345047 |
End bp | 3345775 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639850756 |
Product | ABC transporter related |
Protein accession | YP_997749 |
Protein GI | 121609942 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.240858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.557756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAC CATCCCGGCA GCTACTGCTG CAGGTCAAGG GCCTGCAAGT GGCCTACGGC GGCATACAGG CCGTCAAAGG CGTGGACTTT GAAGTGCGCG CAGGCGAACT GGTCTCGCTG ATCGGCTCCA ACGGCGCCGG CAAGACCAGC ACCATGAAAG CCATCACCGG CACCCTGGCG CCGAGCGCTG GCCACATCGA ATACCTGGGC GCAGACATCC AGGGCCAGGG GGCCTGGGAC CTGGTCAAAA AAGGCTTGGT GATGGTGCCC GAAGGGCGCG GGGTTTTTGC CCGCATGAGC ATCACCGAAA ACCTGCAAAT GGGCGCCTAT ACCCGCAAGG ACCAGGCCGG CATCCTGGCC GACATCGAAA AGATGTTCGG CATCTTCCCG CGCCTGCGCG AGCGCAAGGA CCAACTGGCC GGCACCCTGT CGGGCGGCGA GCAGCAAATG CTGGCCATGG CGCGCGCGCT GATGAGCCAG CCCAAGCTGC TGCTGCTCGA CGAGCCATCG ATGGGCCTGT CGCCGCTGAT GGTCGACAAA ATCTTCGAGG TGGTGCGCGA TGTGTATGCG CTGGGCGTGA CCATCTTGCT GGTCGAACAA AACGCCAGCC GCGCCCTGGC CATTGCCGAC CGTGGCTATG TGATGGAGTC CGGCCTGATC AACATGACCG GCCCCGGCCA GCAACTGCTC AGCGACCCGG GGGTGCGCGC AGCCTATCTG GGCGAGTGA
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Protein sequence | MAEPSRQLLL QVKGLQVAYG GIQAVKGVDF EVRAGELVSL IGSNGAGKTS TMKAITGTLA PSAGHIEYLG ADIQGQGAWD LVKKGLVMVP EGRGVFARMS ITENLQMGAY TRKDQAGILA DIEKMFGIFP RLRERKDQLA GTLSGGEQQM LAMARALMSQ PKLLLLDEPS MGLSPLMVDK IFEVVRDVYA LGVTILLVEQ NASRALAIAD RGYVMESGLI NMTGPGQQLL SDPGVRAAYL GE
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