| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2945 |
|---|
| Symbol | |
|---|
| ID | 4690514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 3294978 |
|---|
| End bp | 3296123 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639850706 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_997699 |
|---|
| Protein GI | 121609892 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.119234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACC CCTTTTCTTC CTACCGGAAA CTGTTCCCGA TTTTGCAGCG GACGGCCCAG
CTCTCCAGTT GCTCGCAAAG CGCGCTGAGC TTGCCGGTGC GCCGCGCCAT CGATGATTAC
CTGGAGGTCT GGCTGCAGCG CGGCGCGGAC TGGGGCTACT GGATGGAGCA GGTGGCGCTG
GCCCGCGCCG AGTTCGCACG CATGATCCAT GCCGAGCCGG GCGATGTGGC AGTGCTGGGC
AGCGTCTCGG ACGCAGCCTC GAGCATCGCC TCGGCCTTGG ACTTCAGCGC TGAACGGCGC
GAGATCGTCA CCACCACGCT GGACTTCCCG TCGCTGTGCC ATGTCTGGCT TGCGCAGCAG
CCACGCGGCG CGCAGGTGCG CTTCGTGCAA GCGCAAGCCG GCGGCACGCG CACCAGCGCG
CAGATCGCCG AGGCCATTGG CGCGCGCACC GCGCTGGTGT CGGTGTCGCA GGTCTGCTTC
TACGACGGCC AGATCGTTGA CATCGCGGCC ACCGGCCGCG CAGCGCGGGC GCAGGGCGCG
CTGCAGTTCG TCGATGCCTA CCAGTCGGCC GGGGCCGTCA GCATCGATGT GCGCGCACAA
GAGCTCGACA TGCTGGCCGC CGGCGCGCAA AAGTACCTGC TGGGCATTCC GGGCATTGCC
TTTCTCTATG TCCGGCCAAC GCTCGCGCAG CGGCTCAGGC CCACGATCAC GGGCTGGTTT
GGCCGGGTCG ATCCGTTCGC CTTCGACCCG CTGCATCTGG ACTTCGCCGA CGGCGCTGCA
CGCTTCAACA CCGGCACGCC GCCGATGATG TGCGCCTGCG CGGCGCGCGC CAGCATGGCC
CTGCTCAACG AGATCGGCAT CCCGGCCATC GAGGCCTATC TGGCCGAACT GTCTGCCCTG
GCCCTGGAGG AAGCCGCGCG CCTGGGCCTG TCGGTGGCCA GTCCGGGGGC CTGCGGTGCG
CCCGTCGCCA AGGGCGCGAA CACCGCCATC CACATTCCGA ACGCGGCGCG GGTCGAGGCC
CAAATGCTGC AATCGGGCTA TGTGGTATCG GCCCGCAACG ACGTGATCCG CATCGCGCCG
CATTTCTACA ACCAGGCCGA CGAGGTGGTC GGCGCTTTGC GCGAACTGGC ACGGTTGACA
CGATGA
|
|---|
| Protein sequence | MKHPFSSYRK LFPILQRTAQ LSSCSQSALS LPVRRAIDDY LEVWLQRGAD WGYWMEQVAL
ARAEFARMIH AEPGDVAVLG SVSDAASSIA SALDFSAERR EIVTTTLDFP SLCHVWLAQQ
PRGAQVRFVQ AQAGGTRTSA QIAEAIGART ALVSVSQVCF YDGQIVDIAA TGRAARAQGA
LQFVDAYQSA GAVSIDVRAQ ELDMLAAGAQ KYLLGIPGIA FLYVRPTLAQ RLRPTITGWF
GRVDPFAFDP LHLDFADGAA RFNTGTPPMM CACAARASMA LLNEIGIPAI EAYLAELSAL
ALEEAARLGL SVASPGACGA PVAKGANTAI HIPNAARVEA QMLQSGYVVS ARNDVIRIAP
HFYNQADEVV GALRELARLT R
|
|---|
| |