Gene Veis_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_2564 
Symbol 
ID4691480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand+ 
Start bp2895508 
End bp2896146 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID639850330 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_997327 
Protein GI121609520 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.252364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.0693579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCT CCATCGCCGA GCTGCGCAAA AGCTACGGGC GCGCCGAACT CAACGAAGAC 
GCGGCGCATG CCGATCCCCT GCAGCAGTTT GACCAGTGGC TCGGGCAAGC CATTGCGGCG 
CAGTTGCCCG AGCCCAATGC GATGACGCTG GCCACCGTGG GCAGTGACCT GCGCCCCAGC 
ACGCGCATCG TGCTCATCAA GGGCTATGAC GAGCGCGGCA TCGTCTGGTT TACCAATTAC 
GACAGCCGCA AGGGGCGTCA AATCGCGGGC AACCCTTGTG CGGCCTTGCA GTTCCATTGG 
GTGGAGTTGG AGCGTGTGGT GCGCATCGAA GGTCTGGTGC AAAAGGTCAG CGATCAGGAA 
AGCGATGCGT ACTTCGACAG CCGCCCGCTC GATTCGCGCA TCGGCGCCTG GGCCAGCCCG 
CAAAGCCAGG TGATTGCAGG CCGTGGTGTG CTGCTGGCCA ATGCCGCCAG GTACGGCGCG 
CAGTTCATGC TCAAGCCACC CCGGCCACAG CATTGGGGCG GGTACCGGCT CGAACCGGAC 
CTGTGGGAGT TCTGGCAGGG GCGCAAGAGC CGCTTGCATG ACCGGTTGCG CTATCGGATG 
GCCGGGGGGC AGTGGGTGCG GGAGCGGCTG GCGCCTTGA
 
Protein sequence
MNLSIAELRK SYGRAELNED AAHADPLQQF DQWLGQAIAA QLPEPNAMTL ATVGSDLRPS 
TRIVLIKGYD ERGIVWFTNY DSRKGRQIAG NPCAALQFHW VELERVVRIE GLVQKVSDQE 
SDAYFDSRPL DSRIGAWASP QSQVIAGRGV LLANAARYGA QFMLKPPRPQ HWGGYRLEPD 
LWEFWQGRKS RLHDRLRYRM AGGQWVRERL AP