| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2553 |
|---|
| Symbol | |
|---|
| ID | 4691300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2884132 |
|---|
| End bp | 2885250 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639850319 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_997316 |
|---|
| Protein GI | 121609509 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000043545 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0689271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCG TTTGCCCATC ATCACCCCCC TCACCACCCC GTCACCACCC CCGAAAGATG
CATCCCATGA CCAAGACCGT TAAACCCTGG CTGGCCGCTT GCGCCCTGGC TGCCGCCGTC
GGCGCCGGCC ATGCCCAGGA ACCCGTGCTG AACCTCTACT CGGCCCGCCA CTACGCCACC
GACGAGGCCC TGTACAGCGG CTTCACCAAG GCCACCGGCA TCAAGATCAA CCGCGTCGAC
GCCGACGATG CCGGCATCCT GGCGCGCCTG AAGACCGAAG GCGCGGCCTC GCCTGCGGAC
GTGATTTTGC TGGTCGATGC CGCCCGCCTG TACAAGGCGG AAGTCGATGG CCTGTTCCAG
CCCATCGTGT CCAAGCTGCT GCTCGACGCC ATTCCCGCCC ACTTGCGCAG CAGCCCTGCG
GCCGACGGCG GCATCTCCTG GTTTGGCCTG TCCACGCGCG CCCGGGTGAT CGTCTACAAC
AAAACGCGCG TGCACAAGTC GCAGGTCGAT AGCTACGAAG CGCTGGCCGA TCCCGGGAAC
AAGGGCCGGC TGTGCATCCG CTCCGGTTCG CACCCCTACA ACCTGAGCCT GTTCGGCGCC
GTGACCGAGC ATCTGGGCGA ACAAAAGGCC GAGGCCTGGC TCAAGGGCCT GCTGGCCAAC
CTGGCCCGCC CCCCCAAGGG TGGCGATACC GACCAAATCA AAGCCGTGGC CGCTGGTGAA
TGCGATATCG CCGTGACCAA CAGCTACTAC CTGGCACGCC TGATGCGCTC CAGCAAGCCG
GAAGACGTGG CCGTGGCCAA CAAGGTGGGC GTGGTGTTTC CCAACCAGGC ATCCTGGGGC
ACGCACCTGA ACATCGCCGG CGGCGCGGTG GCCAGACATG CGAAAAACCA GGCCCATGCC
ATCCGATTCC TGGAATACCT GGCCAGCCCC GAAGCCCAGA ACCACTTTGC CAACGGCAAT
AACGAGTGGC CCGCCGCCAA GGGCGTGATC CTGGACAACC CGGCGCTCAG GGCCATGACC
GGCGACCAGC CGTTCAAGAG CGAAACCATC GCCATCAGCG TCGTGGGCGC GAACATGGCC
CGGGTGCAGC AGATGCTCGA CCGCGTGGGT TTTCCGTGA
|
|---|
| Protein sequence | MIRVCPSSPP SPPRHHPRKM HPMTKTVKPW LAACALAAAV GAGHAQEPVL NLYSARHYAT
DEALYSGFTK ATGIKINRVD ADDAGILARL KTEGAASPAD VILLVDAARL YKAEVDGLFQ
PIVSKLLLDA IPAHLRSSPA ADGGISWFGL STRARVIVYN KTRVHKSQVD SYEALADPGN
KGRLCIRSGS HPYNLSLFGA VTEHLGEQKA EAWLKGLLAN LARPPKGGDT DQIKAVAAGE
CDIAVTNSYY LARLMRSSKP EDVAVANKVG VVFPNQASWG THLNIAGGAV ARHAKNQAHA
IRFLEYLASP EAQNHFANGN NEWPAAKGVI LDNPALRAMT GDQPFKSETI AISVVGANMA
RVQQMLDRVG FP
|
|---|
| |