| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2552 |
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| Symbol | |
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| ID | 4690858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 2883275 |
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| End bp | 2884033 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639850318 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_997315 |
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| Protein GI | 121609508 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000114329 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0658085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCA GCGGCAAGGT ATTCATCGTG ACCGGCGGCG CCTCGGGCTT GGGCGAGGGC
ACGGCGCGCC GGCTGGCGGC CCAGGGCGGC ATGGTCGTGA TTGCCGATAT GCAGGCCGAA
AAAGGCCAGG CCGTGGCCCG GGACATCGGC GGCGCTTTCG TCCCATGCGA CGTGGGCAGC
GAGACCGACG GCCAGGCCGT GGTGGCCCGG GCGGTGGCCA TGGGCAAGCT GATGGGCTTG
GTGAACTGCG CCGGCATTGC GCCTGCCGAA AAGACCGTGG GCAAGAACGG CGCCCATGCG
CTGGCGGTTT TCAGCCGGGC GGTCACGGTC AACCTGATCG GCAGCTTCAA CATGCTGCGC
TTGGCCGCGC AAGCCATGTG CCAGAACGAG CCGGAGCCTA CCGGCGAGCG CGGCGTGCTG
ATCTCCACCG CCAGCGTGGC GGCCTATGAC GGCCAGATCG GCCAGGCGGC GTACTCGGCC
TCCAAGGGCG GCGTGGTCGG CATGACCTTG CCGATCGCCC GCGACCTGGC CCGCAACGGC
ATTCGCAACA TGAGCATCGC GCCCGGCATC TTCGGCACGC CGATGCTGTT CGGCATGCCC
CAGCCGGTGC AGGACGCGCT GGCCGCCAGC GTGCCCTTCC CCAGTCGCCT GGGCACGCCC
GAAGACTACG CCAAGCTGGT GCAGCATATC TTCGAGAACG ACATGCTCAA TGGCGAAGTG
ATCCGCCTCG ATGGCGCGAT TCGCCTGCCG CCCCGCTGA
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| Protein sequence | MQISGKVFIV TGGASGLGEG TARRLAAQGG MVVIADMQAE KGQAVARDIG GAFVPCDVGS
ETDGQAVVAR AVAMGKLMGL VNCAGIAPAE KTVGKNGAHA LAVFSRAVTV NLIGSFNMLR
LAAQAMCQNE PEPTGERGVL ISTASVAAYD GQIGQAAYSA SKGGVVGMTL PIARDLARNG
IRNMSIAPGI FGTPMLFGMP QPVQDALAAS VPFPSRLGTP EDYAKLVQHI FENDMLNGEV
IRLDGAIRLP PR
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