| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2536 |
|---|
| Symbol | |
|---|
| ID | 4693331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2866263 |
|---|
| End bp | 2867831 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639850302 |
|---|
| Product | beta-ketoacyl synthase |
|---|
| Protein accession | YP_997299 |
|---|
| Protein GI | 121609492 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.632823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATGCC ATGAGCGTTC AGATCGAAGC CTTGTTCACC GCTACGCCGG GTCTTCTACA
AAGGCCGAGA TCGTTGCGCC CACGTCCTAC AAGCCTCGCA ACGTGGTAAT CACAGGCGTG
GGTGCCGTGT CCTCTGCGGG GTTCGGCCGG GCCGAGATGT TCGATAACAT CCATGCGGGC
GGGACGTTCT CCTCCAAGGT GTCTGTCGGT GGCACAGGGC TGGACGAGGA TCAGAAGTTG
AAATTTGCTG GCTGGCTCAG CAGAAGCCCC CAGTTGATCG AGACCTTGTC GAAGCTGCCA
TCGAACTCGT CGGGCGAGAT CGAGTTGCGG GTTCACAGCA TCGACGATGA GCAACTCAAG
AAGCAGTTGA GAAATTCCAA CGACAGAAAA GCCAGCAAGA TCGGCAAGAT TGCCTTGCTG
GCAGTCGACA TGGCCCTGTC CGACGGAGGC CGGAAAATCC GGCGCGACGG ACAAGACATT
GCCCTGATCT TCGGCATGTC GAAGGGCCCG CATTCCACGG TCGCGCGTTT CGTGAGCAGT
CTACATCCCG ACCCCAAGCA CATCAGGACC CTGGACTTCC CAGGATCGCT CATGAATGCA
GTGGCCACTT ACTGCTCGAT CTCGAAAGGC ATTCGCGGTT ACAACACGAC GCTCGCCACT
GGCTTCAATT CCGGCTTGGG CGCGTTGACC TATGGCTATG AGCTCATCCG TCAAGGCGTC
CAGCCGCAGG CCATCGTTGG GGGGGCGGAC GAGAGCTTCA TCGGCACTTC GACCTTGCTT
GCCGACCCCA ACAATCAAGT CAACTACGAC CTGGCGGAGG ACGCCTTCAA GACCTACGGC
CGCGATCACG GCGGCCTTCA TGTGGGAGAG GGCGCCTGCA TGGTGCTCCT CGAGGACGAG
GAAGTGGCCC GGCAGCGAGG CGCCAAGGTC CTCGGGCGGC TGCTAGTGTC GCGTCACCGA
TCATCTGTCG GTCTGCGCTG GCCATCGAAG CGCATCGCGG CGTTGCATCG CTTGCCAATA
CGCTCGGTAT TGGCTGCGCG ATGCGCCTTG CGCTGCGCTC CGATGGCTGC GCGCAGCCTA
CGACATCTGA TCCGTGACGC GACACTAGGG TATGGCGTGT CGAACGACGT CTCGTACTTC
CGGGGCGAAG ACGAGGATGC GTCGCCGAAG ATGATGGAAC GGGCGATTCG GCAAGCGCTG
GTCGAAGCCG CAGTCTCGCC CGATCAAGTG AACCTGCTGT GTGGTTCAAG CTGGGGCACC
AAGAGCAGCA GCATGAAAGA GCTAGAAGCG ATTCGCCGGG TCTTCGGCGA GCGCGCCTCC
TCGATTCCTC TGATCAATCA CAACGGATAC TTCGGCTTTG TCGAATCTGC AGCCGCGCTG
TTGAATCTGG CCATGGTGCT GACCTCCGCT GAGAGAGGGC AGATCCTTCC TCTGGGGCAC
ACCAAGGACT TCTGCCAGGC CGGGTTCGAT TTCGTCACGG ACAAGCGCCC GCACAAGTTC
TCGAAAGCCC TGTTGATGGG TGCCACAGAG GGTGGTGGGA ACTACGCCGT CGTCCTGGGG
ACAGAATGA
|
|---|
| Protein sequence | MGCHERSDRS LVHRYAGSST KAEIVAPTSY KPRNVVITGV GAVSSAGFGR AEMFDNIHAG
GTFSSKVSVG GTGLDEDQKL KFAGWLSRSP QLIETLSKLP SNSSGEIELR VHSIDDEQLK
KQLRNSNDRK ASKIGKIALL AVDMALSDGG RKIRRDGQDI ALIFGMSKGP HSTVARFVSS
LHPDPKHIRT LDFPGSLMNA VATYCSISKG IRGYNTTLAT GFNSGLGALT YGYELIRQGV
QPQAIVGGAD ESFIGTSTLL ADPNNQVNYD LAEDAFKTYG RDHGGLHVGE GACMVLLEDE
EVARQRGAKV LGRLLVSRHR SSVGLRWPSK RIAALHRLPI RSVLAARCAL RCAPMAARSL
RHLIRDATLG YGVSNDVSYF RGEDEDASPK MMERAIRQAL VEAAVSPDQV NLLCGSSWGT
KSSSMKELEA IRRVFGERAS SIPLINHNGY FGFVESAAAL LNLAMVLTSA ERGQILPLGH
TKDFCQAGFD FVTDKRPHKF SKALLMGATE GGGNYAVVLG TE
|
|---|
| |